Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chmp4bQ9D8B3 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Chmp4bQ9D8B3 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Chmp4bQ9D8B3 Gm19028-201ENSMUST00000189614 1873 ntBASIC9.67□□□□□ -0.86
Chmp4bQ9D8B3 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chmp4bQ9D8B3 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chmp4bQ9D8B3 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Chmp4bQ9D8B3 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC9.67□□□□□ -0.86
Chmp4bQ9D8B3 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chmp4bQ9D8B3 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC9.67□□□□□ -0.86
Chmp4bQ9D8B3 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chmp4bQ9D8B3 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chmp4bQ9D8B3 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Chmp4bQ9D8B3 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Gm4863-201ENSMUST00000196907 1381 ntBASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Gm44022-201ENSMUST00000203708 5429 ntBASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 CT010453.1-201ENSMUST00000226795 2201 ntBASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Gm10623-201ENSMUST00000209081 2639 ntBASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Gm12445-201ENSMUST00000117947 885 ntBASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Gm15047-201ENSMUST00000118891 454 ntBASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Mir1968-201ENSMUST00000157429 68 ntBASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Gm26408-201ENSMUST00000157672 127 ntBASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Gm17149-201ENSMUST00000164712 375 ntBASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Gm26269-201ENSMUST00000180144 126 ntBASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Gm29562-201ENSMUST00000190113 904 ntBASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Gm43815-201ENSMUST00000197676 990 ntBASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Gm45712-201ENSMUST00000212417 335 ntBASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 CT025685.1-201ENSMUST00000213716 150 ntBASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 AC163296.1-202ENSMUST00000218395 661 ntBASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Gm4898-201ENSMUST00000218519 832 ntBASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 AC163296.1-201ENSMUST00000220004 1266 ntBASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC9.66□□□□□ -0.86
Chmp4bQ9D8B3 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Gm7647-201ENSMUST00000200996 1389 ntBASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 AC154141.1-201ENSMUST00000208403 4136 ntBASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Gm42549-201ENSMUST00000202392 7004 ntBASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Gm11474-201ENSMUST00000120814 277 ntBASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Gm17129-201ENSMUST00000168168 505 ntBASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Gm6838-201ENSMUST00000172851 582 ntBASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Gm37469-201ENSMUST00000193728 890 ntBASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Gm9354-201ENSMUST00000209075 468 ntBASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Chmp4bQ9D8B3 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.87
Chmp4bQ9D8B3 Gm6493-201ENSMUST00000159889 1786 ntBASIC9.65□□□□□ -0.87
Chmp4bQ9D8B3 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Chmp4bQ9D8B3 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms