Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 CT030260.1-201ENSMUST00000223243 442 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 AC124450.1-201ENSMUST00000225569 495 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 AC114008.1-201ENSMUST00000226193 937 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Tnfsf8-201ENSMUST00000030047 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm40841-202ENSMUST00000222823 3989 ntTSL 5 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gin1-203ENSMUST00000112844 2046 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Serpina3f-203ENSMUST00000167049 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Rfx3-208ENSMUST00000174850 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Immt-201ENSMUST00000064062 2728 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Trim21-201ENSMUST00000033264 2793 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Parpbp-201ENSMUST00000048518 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Inpp1-201ENSMUST00000027271 5767 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 F730016J06Rik-202ENSMUST00000128888 3699 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Ttll8-201ENSMUST00000109371 2968 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Ttc16-201ENSMUST00000066478 2979 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Gm37968-201ENSMUST00000195131 3201 ntBASIC8.69□□□□□ -1.02
Clp1Q99LI9 Adtrp-201ENSMUST00000072012 2440 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Lrtm1-202ENSMUST00000224708 1646 ntAPPRIS ALT2 BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Fabp12-201ENSMUST00000029043 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Clp1Q99LI9 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC8.68□□□□□ -1.02
Clp1Q99LI9 Dcaf11-201ENSMUST00000072530 2601 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gsk3b-202ENSMUST00000114750 1750 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Lrrc49-210ENSMUST00000166168 2784 ntTSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Echdc3-201ENSMUST00000042658 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Ints14-202ENSMUST00000170517 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Pikfyve-202ENSMUST00000097707 6641 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Rnasel-201ENSMUST00000086209 2938 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gatad2b-205ENSMUST00000199754 7438 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gm28250-201ENSMUST00000187025 2168 ntTSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gm37157-201ENSMUST00000192120 2168 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gm37798-201ENSMUST00000193026 2169 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gm37112-201ENSMUST00000194389 2168 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gm12949-201ENSMUST00000143382 362 ntTSL 3 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gm22339-201ENSMUST00000157718 62 ntBASIC8.68□□□□□ -1.02
Clp1Q99LI9 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gm38242-201ENSMUST00000192354 430 ntTSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Mir1892-201ENSMUST00000197752 80 ntBASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gm19092-201ENSMUST00000209036 969 ntBASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gm7151-201ENSMUST00000211511 954 ntBASIC8.68□□□□□ -1.02
Clp1Q99LI9 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 AC154245.1-201ENSMUST00000224615 601 ntBASIC8.68□□□□□ -1.02
Clp1Q99LI9 AC124196.1-201ENSMUST00000225970 1032 ntBASIC8.68□□□□□ -1.02
Clp1Q99LI9 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gm10155-201ENSMUST00000084598 483 ntBASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gm30414-201ENSMUST00000194886 2596 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Mamdc4-201ENSMUST00000095117 3990 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Neurod1-201ENSMUST00000041099 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Dhcr7-207ENSMUST00000141916 2752 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Elp3-201ENSMUST00000022609 2851 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Grk1-201ENSMUST00000033827 7425 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Pik3c3-201ENSMUST00000091978 2998 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gja1-201ENSMUST00000068581 3071 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Bach2-207ENSMUST00000171600 8493 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Olfr117-203ENSMUST00000215414 3498 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gprc5c-202ENSMUST00000053361 3667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Gm39244-201ENSMUST00000209663 1940 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Lipc-201ENSMUST00000034731 1920 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Selenop-203ENSMUST00000159216 2085 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Prdm15-201ENSMUST00000095849 6346 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Eif2ak4-202ENSMUST00000102527 4906 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Slco1c1-206ENSMUST00000205214 2515 ntTSL 5 BASIC8.68□□□□□ -1.02
Clp1Q99LI9 Sub1-201ENSMUST00000022816 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Clp1Q99LI9 Plppr1-201ENSMUST00000076670 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms