Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 AC154806.1-202ENSMUST00000227949 885 ntBASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Nup88Q8CEC0 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Gm44996-201ENSMUST00000208787 2980 ntBASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Gm6490-201ENSMUST00000111862 461 ntBASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Gm13921-201ENSMUST00000119411 463 ntBASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Gm12611-201ENSMUST00000119452 1037 ntBASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Gm11955-201ENSMUST00000119801 470 ntBASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Gm13586-201ENSMUST00000121784 464 ntBASIC9.01□□□□□ -0.97
Nup88Q8CEC0 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Gm22424-201ENSMUST00000158527 87 ntBASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC9.01□□□□□ -0.97
Nup88Q8CEC0 4921523L03Rik-201ENSMUST00000175729 1186 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Gm28239-201ENSMUST00000190225 447 ntBASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Gm20690-202ENSMUST00000195126 355 ntBASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Gm43840-201ENSMUST00000199444 484 ntBASIC9.01□□□□□ -0.97
Nup88Q8CEC0 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Gm43008-201ENSMUST00000202346 286 ntBASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 AC241621.1-201ENSMUST00000224499 430 ntBASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Mir146b-201ENSMUST00000093619 109 ntBASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Nup88Q8CEC0 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Nup88Q8CEC0 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Nup88Q8CEC0 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Nup88Q8CEC0 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC9□□□□□ -0.97
Nup88Q8CEC0 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Nup88Q8CEC0 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC9□□□□□ -0.97
Nup88Q8CEC0 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC9□□□□□ -0.97
Nup88Q8CEC0 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC9□□□□□ -0.97
Nup88Q8CEC0 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Nup88Q8CEC0 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Nup88Q8CEC0 Gm44187-201ENSMUST00000204735 1929 ntBASIC9□□□□□ -0.97
Nup88Q8CEC0 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Nup88Q8CEC0 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC9□□□□□ -0.97
Nup88Q8CEC0 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC9□□□□□ -0.97
Nup88Q8CEC0 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC9□□□□□ -0.97
Nup88Q8CEC0 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC9□□□□□ -0.97
Nup88Q8CEC0 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC9□□□□□ -0.97
Nup88Q8CEC0 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC9□□□□□ -0.97
Nup88Q8CEC0 Gm7162-201ENSMUST00000161205 1024 ntBASIC9□□□□□ -0.97
Nup88Q8CEC0 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Nup88Q8CEC0 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC9□□□□□ -0.97
Nup88Q8CEC0 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC9□□□□□ -0.97
Nup88Q8CEC0 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC9□□□□□ -0.97
Nup88Q8CEC0 Gm26269-201ENSMUST00000180144 126 ntBASIC9□□□□□ -0.97
Nup88Q8CEC0 Mir7058-201ENSMUST00000184637 75 ntBASIC9□□□□□ -0.97
Nup88Q8CEC0 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC9□□□□□ -0.97
Nup88Q8CEC0 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Nup88Q8CEC0 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC9□□□□□ -0.97
Nup88Q8CEC0 Gm4545-201ENSMUST00000190797 603 ntBASIC9□□□□□ -0.97
Nup88Q8CEC0 Gm38063-201ENSMUST00000193990 342 ntBASIC9□□□□□ -0.97
Nup88Q8CEC0 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC9□□□□□ -0.97
Nup88Q8CEC0 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC9□□□□□ -0.97
Nup88Q8CEC0 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms