Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Trim52Q8CDV4 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC9.45□□□□□ -0.9
Trim52Q8CDV4 Cacna1d-202ENSMUST00000112250 8688 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trim52Q8CDV4 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trim52Q8CDV4 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Gm44001-201ENSMUST00000203158 3773 ntBASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Gm7265-201ENSMUST00000192735 3502 ntBASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Gm11726-201ENSMUST00000121028 424 ntBASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Gm22604-201ENSMUST00000157604 311 ntBASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Gm20690-201ENSMUST00000177341 315 ntBASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Gm27001-201ENSMUST00000182252 936 ntBASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Gm7341-201ENSMUST00000192183 926 ntBASIC9.44□□□□□ -0.9
Trim52Q8CDV4 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Gm34583-203ENSMUST00000202586 454 ntBASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Gm4972-201ENSMUST00000211108 1254 ntBASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Gm18860-201ENSMUST00000212029 764 ntBASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Gm38697-201ENSMUST00000198061 1746 ntBASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Supt20-202ENSMUST00000170552 1968 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim52Q8CDV4 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Gm15644-201ENSMUST00000121764 387 ntBASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Gm25281-201ENSMUST00000157270 104 ntBASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Pea15b-201ENSMUST00000182806 387 ntBASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Gm28266-201ENSMUST00000191410 439 ntBASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Gm44192-201ENSMUST00000204195 556 ntBASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 AC134869.2-201ENSMUST00000225788 421 ntBASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Gm45746-201ENSMUST00000212623 2447 ntBASIC9.43□□□□□ -0.9
Trim52Q8CDV4 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Mettl14-202ENSMUST00000090371 7197 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim52Q8CDV4 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim52Q8CDV4 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim52Q8CDV4 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim52Q8CDV4 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim52Q8CDV4 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms