Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm37199-201ENSMUST00000193881 4065 ntBASIC9□□□□□ -0.97
Vps53Q8CCB4 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC9□□□□□ -0.97
Vps53Q8CCB4 Gm6767-201ENSMUST00000118650 1381 ntBASIC9□□□□□ -0.97
Vps53Q8CCB4 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Vps53Q8CCB4 Gm19031-201ENSMUST00000176280 1365 ntBASIC9□□□□□ -0.97
Vps53Q8CCB4 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC9□□□□□ -0.97
Vps53Q8CCB4 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC9□□□□□ -0.97
Vps53Q8CCB4 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC9□□□□□ -0.97
Vps53Q8CCB4 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Vps53Q8CCB4 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC9□□□□□ -0.97
Vps53Q8CCB4 Znhit3-201ENSMUST00000103195 998 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Vps53Q8CCB4 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Vps53Q8CCB4 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Vps53Q8CCB4 Gm16057-201ENSMUST00000120811 759 ntBASIC9□□□□□ -0.97
Vps53Q8CCB4 Gm8577-201ENSMUST00000122420 986 ntBASIC9□□□□□ -0.97
Vps53Q8CCB4 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC9□□□□□ -0.97
Vps53Q8CCB4 Gm23757-201ENSMUST00000158353 100 ntBASIC9□□□□□ -0.97
Vps53Q8CCB4 Gm38170-201ENSMUST00000195404 816 ntBASIC9□□□□□ -0.97
Vps53Q8CCB4 Gm8925-201ENSMUST00000197212 763 ntBASIC9□□□□□ -0.97
Vps53Q8CCB4 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC9□□□□□ -0.97
Vps53Q8CCB4 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC9□□□□□ -0.97
Vps53Q8CCB4 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC9□□□□□ -0.97
Vps53Q8CCB4 Gm18226-201ENSMUST00000215261 521 ntBASIC9□□□□□ -0.97
Vps53Q8CCB4 Gm7239-201ENSMUST00000220981 860 ntBASIC9□□□□□ -0.97
Vps53Q8CCB4 AC125543.2-201ENSMUST00000222114 105 ntBASIC9□□□□□ -0.97
Vps53Q8CCB4 CT030170.6-202ENSMUST00000223186 544 ntBASIC9□□□□□ -0.97
Vps53Q8CCB4 CT030170.7-201ENSMUST00000223372 103 ntBASIC9□□□□□ -0.97
Vps53Q8CCB4 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC9□□□□□ -0.97
Vps53Q8CCB4 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC9□□□□□ -0.97
Vps53Q8CCB4 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Vps53Q8CCB4 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Vps53Q8CCB4 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Vps53Q8CCB4 AC130219.1-201ENSMUST00000228406 3433 ntBASIC9□□□□□ -0.97
Vps53Q8CCB4 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC9□□□□□ -0.97
Vps53Q8CCB4 Gm6350-201ENSMUST00000195099 1339 ntBASIC9□□□□□ -0.97
Vps53Q8CCB4 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Vps53Q8CCB4 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Vps53Q8CCB4 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm38339-201ENSMUST00000195479 1829 ntBASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm10862-201ENSMUST00000193956 3350 ntBASIC8.99□□□□□ -0.97
Vps53Q8CCB4 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm42700-201ENSMUST00000199071 2437 ntBASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm11558-201ENSMUST00000118454 459 ntBASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm13252-201ENSMUST00000119355 321 ntBASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm11517-201ENSMUST00000119491 387 ntBASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm13224-201ENSMUST00000119586 94 ntBASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm12402-201ENSMUST00000120536 334 ntBASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm13726-201ENSMUST00000121278 794 ntBASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm14328-201ENSMUST00000122178 408 ntBASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm371-201ENSMUST00000142240 1245 ntBASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm26959-201ENSMUST00000182376 978 ntBASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm24362-201ENSMUST00000183220 416 ntBASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm28975-201ENSMUST00000186412 686 ntBASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm3121-201ENSMUST00000187086 406 ntBASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm20690-202ENSMUST00000195126 355 ntBASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 CT572999.1-201ENSMUST00000220315 1260 ntBASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm43747-201ENSMUST00000201412 1330 ntBASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Vps53Q8CCB4 Gm44022-201ENSMUST00000203708 5429 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Gm44752-201ENSMUST00000207140 3305 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Gm37109-201ENSMUST00000195475 2254 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Gm23946-201ENSMUST00000104423 197 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms