Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Tnfaip8-213ENSMUST00000180305 369 ntTSL 5 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 4933438B17Rik-201ENSMUST00000196336 1169 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Gm19175-201ENSMUST00000199895 916 ntBASIC6.59□□□□□ -1.35
Rif1Q6PR54 Gm5981-201ENSMUST00000199912 487 ntBASIC6.59□□□□□ -1.35
Rif1Q6PR54 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Gm18907-201ENSMUST00000209719 932 ntBASIC6.59□□□□□ -1.35
Rif1Q6PR54 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.59□□□□□ -1.35
Rif1Q6PR54 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Olfr312-201ENSMUST00000078217 927 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Tfpi-206ENSMUST00000111718 2027 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Ank3-206ENSMUST00000092434 5886 ntAPPRIS P4 TSL 5 BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Adar-202ENSMUST00000098924 5909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Slc7a13-201ENSMUST00000035890 2141 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rif1Q6PR54 Aasdh-201ENSMUST00000069709 3381 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Rif1Q6PR54 Ulk4-201ENSMUST00000051479 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Rif1Q6PR54 Gm12346-201ENSMUST00000121455 2255 ntBASIC6.59□□□□□ -1.36
Rif1Q6PR54 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Rif1Q6PR54 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
Rif1Q6PR54 Mark3-206ENSMUST00000221459 2807 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Spata17-205ENSMUST00000183819 1552 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Ednrb-201ENSMUST00000022718 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Trpd52l3-201ENSMUST00000025727 2231 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm8320-201ENSMUST00000177584 1762 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm8303-201ENSMUST00000178371 1762 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm13651-201ENSMUST00000119086 1110 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm12877-201ENSMUST00000120383 510 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm12321-201ENSMUST00000121485 804 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Mir7230-201ENSMUST00000195977 56 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 AC113107.1-201ENSMUST00000218358 396 ntTSL 3 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 CT025639.2-201ENSMUST00000224440 1220 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Nat8f5-201ENSMUST00000032074 986 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm29486-201ENSMUST00000088648 372 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm5446-201ENSMUST00000091762 784 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Eif2ak4-205ENSMUST00000110872 4907 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm6327-201ENSMUST00000171185 1335 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm42460-201ENSMUST00000198863 2567 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Adgrl3-213ENSMUST00000120292 5026 ntTSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 AC132392.1-202ENSMUST00000216652 2681 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 4933416O17Rik-201ENSMUST00000220972 2122 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Parp9-201ENSMUST00000023622 2973 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm43982-201ENSMUST00000204995 1829 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gabrq-202ENSMUST00000114553 4943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Rad51d-201ENSMUST00000018985 3426 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm13400-201ENSMUST00000117436 380 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm5656-201ENSMUST00000171020 1096 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm44422-201ENSMUST00000204142 1025 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 AC192334.3-201ENSMUST00000221828 569 ntTSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 AC171241.2-201ENSMUST00000228744 892 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm28177-201ENSMUST00000185516 3532 ntTSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Sncaip-202ENSMUST00000115410 3585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gm45354-201ENSMUST00000199820 2557 ntBASIC6.58□□□□□ -1.36
Rif1Q6PR54 Olfr214-205ENSMUST00000217313 2802 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Rif1Q6PR54 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Eya3-201ENSMUST00000020197 4976 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Gm33994-201ENSMUST00000193724 2414 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Rps6ka1-205ENSMUST00000157067 2637 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rif1Q6PR54 Tro-207ENSMUST00000163969 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 116 ms