Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Tll2-202ENSMUST00000169941 3318 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Ncald-201ENSMUST00000090150 3733 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Slc6a16-203ENSMUST00000213347 2865 ntAPPRIS P5 TSL 5 BASIC8.35□□□□□ -1.07
Sox1P53783 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Sox1P53783 Gm24340-201ENSMUST00000104208 97 ntBASIC8.35□□□□□ -1.07
Sox1P53783 Gm24472-201ENSMUST00000104484 132 ntBASIC8.35□□□□□ -1.07
Sox1P53783 Gm6491-201ENSMUST00000118273 990 ntBASIC8.35□□□□□ -1.07
Sox1P53783 Gm5759-201ENSMUST00000119203 811 ntBASIC8.35□□□□□ -1.07
Sox1P53783 Gm14906-201ENSMUST00000119265 390 ntBASIC8.35□□□□□ -1.07
Sox1P53783 Gm13500-201ENSMUST00000119348 824 ntBASIC8.35□□□□□ -1.07
Sox1P53783 Gm14485-201ENSMUST00000119489 493 ntBASIC8.35□□□□□ -1.07
Sox1P53783 Rhox3g-201ENSMUST00000119965 991 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Sox1P53783 Gm12967-201ENSMUST00000122147 289 ntBASIC8.35□□□□□ -1.07
Sox1P53783 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC8.35□□□□□ -1.07
Sox1P53783 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC8.35□□□□□ -1.07
Sox1P53783 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC8.35□□□□□ -1.07
Sox1P53783 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC8.35□□□□□ -1.07
Sox1P53783 Gm23819-201ENSMUST00000158744 109 ntBASIC8.35□□□□□ -1.07
Sox1P53783 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Sox1P53783 Gm24083-201ENSMUST00000175174 120 ntBASIC8.35□□□□□ -1.07
Sox1P53783 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Sox1P53783 Gm16596-201ENSMUST00000180576 604 ntTSL 3 BASIC8.35□□□□□ -1.07
Sox1P53783 Gm9169-201ENSMUST00000182930 536 ntBASIC8.35□□□□□ -1.07
Sox1P53783 Gm26915-201ENSMUST00000183080 748 ntBASIC8.35□□□□□ -1.07
Sox1P53783 Gm29371-201ENSMUST00000186823 885 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Gm18875-201ENSMUST00000188563 882 ntBASIC8.35□□□□□ -1.07
Sox1P53783 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Gm42509-201ENSMUST00000197390 781 ntBASIC8.35□□□□□ -1.07
Sox1P53783 Gm43629-201ENSMUST00000201782 704 ntBASIC8.35□□□□□ -1.07
Sox1P53783 Gm43985-201ENSMUST00000203283 757 ntBASIC8.35□□□□□ -1.07
Sox1P53783 5830408C22Rik-204ENSMUST00000211653 351 ntTSL 3 BASIC8.35□□□□□ -1.07
Sox1P53783 AC140409.4-201ENSMUST00000215757 538 ntBASIC8.35□□□□□ -1.07
Sox1P53783 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC8.35□□□□□ -1.07
Sox1P53783 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC8.35□□□□□ -1.07
Sox1P53783 CT010453.2-201ENSMUST00000227005 483 ntBASIC8.35□□□□□ -1.07
Sox1P53783 AC192088.2-201ENSMUST00000227590 411 ntBASIC8.35□□□□□ -1.07
Sox1P53783 AC130673.1-201ENSMUST00000227992 435 ntBASIC8.35□□□□□ -1.07
Sox1P53783 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Sox1P53783 Gm6436-201ENSMUST00000077163 451 ntBASIC8.35□□□□□ -1.07
Sox1P53783 Olfr298-201ENSMUST00000077800 999 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Sox1P53783 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Vmn1r37-206ENSMUST00000228791 1617 ntAPPRIS ALT2 BASIC8.35□□□□□ -1.07
Sox1P53783 Casq2-201ENSMUST00000029454 2556 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Sla-205ENSMUST00000168589 1412 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Lhx4-201ENSMUST00000027740 5514 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Gm14762-201ENSMUST00000105109 1771 ntBASIC8.35□□□□□ -1.07
Sox1P53783 Stk11ip-202ENSMUST00000113553 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Mitf-203ENSMUST00000101123 2144 ntTSL 5 BASIC8.35□□□□□ -1.07
Sox1P53783 Mitf-204ENSMUST00000113339 2144 ntTSL 5 BASIC8.35□□□□□ -1.07
Sox1P53783 Creb1-202ENSMUST00000087366 8364 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Tcf4-201ENSMUST00000066717 4250 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Sox1P53783 Ttll8-201ENSMUST00000109371 2968 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Cecr2-201ENSMUST00000100993 4849 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Sox1P53783 Klhl41-201ENSMUST00000100050 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Lyn-202ENSMUST00000103010 3387 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
Sox1P53783 Trim43a-201ENSMUST00000164661 1981 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Gm43336-201ENSMUST00000200487 4504 ntBASIC8.34□□□□□ -1.07
Sox1P53783 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Sox1P53783 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Sox1P53783 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Sox1P53783 Prokr2-202ENSMUST00000110156 3829 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Sox1P53783 Gm13731-201ENSMUST00000117332 196 ntBASIC8.34□□□□□ -1.07
Sox1P53783 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC8.34□□□□□ -1.07
Sox1P53783 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC8.34□□□□□ -1.07
Sox1P53783 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC8.34□□□□□ -1.07
Sox1P53783 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Gm12504-202ENSMUST00000148026 306 ntBASIC8.34□□□□□ -1.07
Sox1P53783 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC8.34□□□□□ -1.07
Sox1P53783 Gm22600-201ENSMUST00000157598 269 ntBASIC8.34□□□□□ -1.07
Sox1P53783 Gm24551-201ENSMUST00000158645 92 ntBASIC8.34□□□□□ -1.07
Sox1P53783 Gm17973-201ENSMUST00000174509 520 ntBASIC8.34□□□□□ -1.07
Sox1P53783 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC8.34□□□□□ -1.07
Sox1P53783 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Sox1P53783 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Sox1P53783 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Sox1P53783 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Zfp572-202ENSMUST00000184208 1078 ntBASIC8.34□□□□□ -1.07
Sox1P53783 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Gm38203-201ENSMUST00000191815 245 ntBASIC8.34□□□□□ -1.07
Sox1P53783 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC8.34□□□□□ -1.07
Sox1P53783 Gm18748-201ENSMUST00000198507 622 ntBASIC8.34□□□□□ -1.07
Sox1P53783 Gm44374-201ENSMUST00000199821 140 ntBASIC8.34□□□□□ -1.07
Sox1P53783 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Sox1P53783 Gm18943-201ENSMUST00000207357 1216 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms