Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 AC163296.2-201ENSMUST00000220177 1315 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 AC158388.1-201ENSMUST00000225441 256 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 CT009515.4-201ENSMUST00000228165 1494 ntBASIC8.16□□□□□ -1.1
Shmt1P50431 Lmx1a-201ENSMUST00000028003 3347 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Shmt1P50431 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC8.16□□□□□ -1.1
Shmt1P50431 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC8.16□□□□□ -1.1
Shmt1P50431 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shmt1P50431 Gm7562-201ENSMUST00000210502 2537 ntBASIC8.15□□□□□ -1.1
Shmt1P50431 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Shmt1P50431 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC8.15□□□□□ -1.1
Shmt1P50431 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Shmt1P50431 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Shmt1P50431 Gm43621-201ENSMUST00000202733 2022 ntBASIC8.15□□□□□ -1.1
Shmt1P50431 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Shmt1P50431 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Shmt1P50431 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Shmt1P50431 Dgkh-206ENSMUST00000228362 3308 ntBASIC8.15□□□□□ -1.1
Shmt1P50431 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Shmt1P50431 Gm43571-201ENSMUST00000200067 3098 ntBASIC8.15□□□□□ -1.1
Shmt1P50431 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC8.15□□□□□ -1.1
Shmt1P50431 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Shmt1P50431 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Shmt1P50431 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Shmt1P50431 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Shmt1P50431 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC8.15□□□□□ -1.1
Shmt1P50431 Gm25083-201ENSMUST00000102319 92 ntBASIC8.15□□□□□ -1.1
Shmt1P50431 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Shmt1P50431 Gm14659-201ENSMUST00000117667 843 ntBASIC8.15□□□□□ -1.1
Shmt1P50431 Gm5390-201ENSMUST00000119069 1230 ntBASIC8.15□□□□□ -1.1
Shmt1P50431 Gm11188-201ENSMUST00000122382 388 ntBASIC8.15□□□□□ -1.1
Shmt1P50431 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC8.15□□□□□ -1.1
Shmt1P50431 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Shmt1P50431 Gm20111-201ENSMUST00000184830 319 ntBASIC8.15□□□□□ -1.1
Shmt1P50431 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC8.15□□□□□ -1.1
Shmt1P50431 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Shmt1P50431 Gm37604-201ENSMUST00000191749 1272 ntBASIC8.15□□□□□ -1.1
Shmt1P50431 Ighv1-17-201ENSMUST00000194435 350 ntBASIC8.15□□□□□ -1.1
Shmt1P50431 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC8.15□□□□□ -1.1
Shmt1P50431 Gm44760-201ENSMUST00000206375 1173 ntBASIC8.15□□□□□ -1.1
Shmt1P50431 AC153936.1-201ENSMUST00000219874 395 ntBASIC8.15□□□□□ -1.1
Shmt1P50431 AC154785.1-201ENSMUST00000223280 572 ntBASIC8.15□□□□□ -1.1
Shmt1P50431 Mir135b-201ENSMUST00000083501 97 ntBASIC8.15□□□□□ -1.1
Shmt1P50431 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Shmt1P50431 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Shmt1P50431 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Shmt1P50431 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Shmt1P50431 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Shmt1P50431 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Shmt1P50431 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
Shmt1P50431 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Shmt1P50431 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Shmt1P50431 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Shmt1P50431 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Shmt1P50431 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC8.15□□□□□ -1.11
Shmt1P50431 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Shmt1P50431 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Shmt1P50431 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Shmt1P50431 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC8.14□□□□□ -1.11
Shmt1P50431 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Shmt1P50431 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Shmt1P50431 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Shmt1P50431 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC8.14□□□□□ -1.11
Shmt1P50431 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Shmt1P50431 Gm44509-201ENSMUST00000205400 1324 ntBASIC8.14□□□□□ -1.11
Shmt1P50431 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 Gm24462-201ENSMUST00000102430 106 ntBASIC8.14□□□□□ -1.11
Shmt1P50431 Gm8624-201ENSMUST00000118083 432 ntBASIC8.14□□□□□ -1.11
Shmt1P50431 Gm11474-201ENSMUST00000120814 277 ntBASIC8.14□□□□□ -1.11
Shmt1P50431 Gm12752-201ENSMUST00000121657 811 ntBASIC8.14□□□□□ -1.11
Shmt1P50431 Gm12634-201ENSMUST00000122157 992 ntBASIC8.14□□□□□ -1.11
Shmt1P50431 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC8.14□□□□□ -1.11
Shmt1P50431 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC8.14□□□□□ -1.11
Shmt1P50431 Gm10157-201ENSMUST00000139408 343 ntBASIC8.14□□□□□ -1.11
Shmt1P50431 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC8.14□□□□□ -1.11
Shmt1P50431 Gm4835-201ENSMUST00000155839 972 ntBASIC8.14□□□□□ -1.11
Shmt1P50431 Gm22915-201ENSMUST00000157615 136 ntBASIC8.14□□□□□ -1.11
Shmt1P50431 Olfr721-ps1-201ENSMUST00000165291 975 ntBASIC8.14□□□□□ -1.11
Shmt1P50431 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Shmt1P50431 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Shmt1P50431 Gm29562-201ENSMUST00000190113 904 ntBASIC8.14□□□□□ -1.11
Shmt1P50431 Gm28266-201ENSMUST00000191410 439 ntBASIC8.14□□□□□ -1.11
Shmt1P50431 Gm37469-201ENSMUST00000193728 890 ntBASIC8.14□□□□□ -1.11
Shmt1P50431 Gm43226-201ENSMUST00000202438 259 ntBASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms