Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm11468-201ENSMUST00000152987 383 ntTSL 2 BASIC8.02□□□□□ -1.13
Hoxd9P28357 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm19402-201ENSMUST00000180297 801 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm7481-201ENSMUST00000182020 995 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 Mrgprc7-ps-201ENSMUST00000187169 952 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm6445-201ENSMUST00000189515 1112 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm28401-202ENSMUST00000190769 550 ntTSL 5 BASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm18747-201ENSMUST00000198129 648 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 Rpl7a-ps7-201ENSMUST00000198361 776 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm43806-201ENSMUST00000201766 469 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm9038-201ENSMUST00000203400 604 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 Olfr61-204ENSMUST00000211685 1212 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
Hoxd9P28357 2310003N18Rik-201ENSMUST00000215655 458 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 AC153937.2-202ENSMUST00000219583 670 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm33115-202ENSMUST00000223487 703 ntTSL 5 BASIC8.02□□□□□ -1.13
Hoxd9P28357 AC110380.1-201ENSMUST00000226987 389 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 Borcs8-201ENSMUST00000002418 810 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Hoxd9P28357 6330409D20Rik-201ENSMUST00000009695 1119 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 Zfp638-201ENSMUST00000032088 6199 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Hoxd9P28357 Tyrp1-202ENSMUST00000102831 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Hoxd9P28357 Cblb-206ENSMUST00000227879 3866 ntAPPRIS ALT2 BASIC8.02□□□□□ -1.13
Hoxd9P28357 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
Hoxd9P28357 Ndrg3-203ENSMUST00000109558 4023 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 Zscan21-205ENSMUST00000110961 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 Rtkn2-202ENSMUST00000105437 3932 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.13
Hoxd9P28357 Tbata-204ENSMUST00000122261 1431 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Hoxd9P28357 Serpina3f-202ENSMUST00000121337 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm10472-201ENSMUST00000193014 2102 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 6430562O15Rik-202ENSMUST00000180808 3997 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm16497-201ENSMUST00000222024 2842 ntTSL 2 BASIC8.02□□□□□ -1.13
Hoxd9P28357 Nbr1-204ENSMUST00000107208 4344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm45062-201ENSMUST00000162564 5842 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
Hoxd9P28357 9130214F15Rik-201ENSMUST00000208727 1653 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC8.02□□□□□ -1.13
Hoxd9P28357 Ctnnd1-221ENSMUST00000111695 6344 ntTSL 5 BASIC8.01□□□□□ -1.13
Hoxd9P28357 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Hoxd9P28357 Sec24c-201ENSMUST00000048657 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hoxd9P28357 Gm14415-201ENSMUST00000118260 1578 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 Dbt-201ENSMUST00000000349 3301 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hoxd9P28357 Phldb2-202ENSMUST00000076333 5347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hoxd9P28357 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hoxd9P28357 Oat-201ENSMUST00000084500 2152 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hoxd9P28357 Gm42615-201ENSMUST00000197704 1820 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Hoxd9P28357 Olfr806-203ENSMUST00000215142 3108 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Hoxd9P28357 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hoxd9P28357 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hoxd9P28357 Gm28307-201ENSMUST00000190685 2694 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Hoxd9P28357 Rnf6-208ENSMUST00000169407 3276 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Hoxd9P28357 AC155710.1-201ENSMUST00000219913 1353 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hoxd9P28357 Nup98-203ENSMUST00000210682 6694 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Hoxd9P28357 Gm5893-201ENSMUST00000135286 1880 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Hoxd9P28357 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hoxd9P28357 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hoxd9P28357 Gm25594-201ENSMUST00000102274 82 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 Gm25607-201ENSMUST00000104020 127 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 Rpl23a-ps3-201ENSMUST00000104925 468 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 Cga-202ENSMUST00000108130 609 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Hoxd9P28357 Gm12310-201ENSMUST00000118013 492 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 Gm12459-201ENSMUST00000120659 356 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 Gm16471-201ENSMUST00000121940 618 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Hoxd9P28357 Gm12223-201ENSMUST00000135468 528 ntTSL 3 BASIC8.01□□□□□ -1.13
Hoxd9P28357 Gm23441-201ENSMUST00000157268 127 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 Gm17377-201ENSMUST00000165184 207 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 Serpinc1-202ENSMUST00000191936 725 ntTSL 3 BASIC8.01□□□□□ -1.13
Hoxd9P28357 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Hoxd9P28357 Gm42529-201ENSMUST00000201843 741 ntTSL 3 BASIC8.01□□□□□ -1.13
Hoxd9P28357 Gm20072-201ENSMUST00000202231 292 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 Ceacam1-204ENSMUST00000205308 993 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Hoxd9P28357 Gm44673-201ENSMUST00000205692 996 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 Gm38405-201ENSMUST00000207760 1140 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Hoxd9P28357 AC142407.1-201ENSMUST00000214371 494 ntTSL 5 BASIC8.01□□□□□ -1.13
Hoxd9P28357 AC162467.1-201ENSMUST00000220254 621 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 AC165254.1-203ENSMUST00000222925 574 ntTSL 3 BASIC8.01□□□□□ -1.13
Hoxd9P28357 AC158983.1-201ENSMUST00000225691 221 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 Pglyrp4-201ENSMUST00000047745 1218 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hoxd9P28357 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Hoxd9P28357 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Hoxd9P28357 Gm10024-201ENSMUST00000075421 553 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Hoxd9P28357 Gm25129-201ENSMUST00000082651 133 ntBASIC8.01□□□□□ -1.13
Hoxd9P28357 Gm10335-201ENSMUST00000096020 468 ntBASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms