Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm44561-201ENSMUST00000208869 264 ntBASIC8.89□□□□□ -0.99
Col1a1P11087 AC069561.1-201ENSMUST00000213750 424 ntBASIC8.89□□□□□ -0.99
Col1a1P11087 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC8.89□□□□□ -0.99
Col1a1P11087 CT030182.4-201ENSMUST00000223647 645 ntBASIC8.89□□□□□ -0.99
Col1a1P11087 AC124397.1-201ENSMUST00000224296 653 ntBASIC8.89□□□□□ -0.99
Col1a1P11087 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Col1a1P11087 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
Col1a1P11087 Rims2-205ENSMUST00000227243 4760 ntAPPRIS ALT2 BASIC8.89□□□□□ -0.99
Col1a1P11087 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC8.89□□□□□ -0.99
Col1a1P11087 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC8.89□□□□□ -0.99
Col1a1P11087 Zfp445-206ENSMUST00000216063 6189 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Dpp6-203ENSMUST00000120555 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC8.89□□□□□ -0.99
Col1a1P11087 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 AC101875.1-201ENSMUST00000222666 2223 ntBASIC8.89□□□□□ -0.99
Col1a1P11087 Ank3-219ENSMUST00000182437 3113 ntTSL 5 BASIC8.89□□□□□ -0.99
Col1a1P11087 AC123842.1-201ENSMUST00000217622 3118 ntTSL 5 BASIC8.89□□□□□ -0.99
Col1a1P11087 Prkrip1-204ENSMUST00000151786 3893 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Col1a1P11087 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC8.89□□□□□ -0.99
Col1a1P11087 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
Col1a1P11087 Col4a5-202ENSMUST00000112931 6536 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Gm44001-201ENSMUST00000203158 3773 ntBASIC8.89□□□□□ -0.99
Col1a1P11087 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Col1a1P11087 Gm12593-201ENSMUST00000120981 743 ntBASIC8.89□□□□□ -0.99
Col1a1P11087 Gm26480-201ENSMUST00000122619 297 ntBASIC8.89□□□□□ -0.99
Col1a1P11087 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC8.89□□□□□ -0.99
Col1a1P11087 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC8.89□□□□□ -0.99
Col1a1P11087 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC8.89□□□□□ -0.99
Col1a1P11087 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Col1a1P11087 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC8.89□□□□□ -0.99
Col1a1P11087 n-R5s93-201ENSMUST00000180091 119 ntBASIC8.89□□□□□ -0.99
Col1a1P11087 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Col1a1P11087 Gm27156-201ENSMUST00000184589 754 ntBASIC8.89□□□□□ -0.99
Col1a1P11087 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC8.89□□□□□ -0.99
Col1a1P11087 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC8.89□□□□□ -0.99
Col1a1P11087 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC8.89□□□□□ -0.99
Col1a1P11087 AC099760.1-201ENSMUST00000196300 153 ntBASIC8.89□□□□□ -0.99
Col1a1P11087 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Lrrc29-204ENSMUST00000210801 3830 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC8.89□□□□□ -0.99
Col1a1P11087 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 AV026068-229ENSMUST00000225516 595 ntBASIC8.89□□□□□ -0.99
Col1a1P11087 Sall1-201ENSMUST00000034090 5265 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Tmcc3-202ENSMUST00000117460 3217 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col1a1P11087 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC8.88□□□□□ -0.99
Col1a1P11087 Sec24c-201ENSMUST00000048657 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col1a1P11087 Gm44093-201ENSMUST00000204381 1802 ntBASIC8.88□□□□□ -0.99
Col1a1P11087 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC8.88□□□□□ -0.99
Col1a1P11087 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC8.88□□□□□ -0.99
Col1a1P11087 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Col1a1P11087 AC061963.2-201ENSMUST00000213541 2739 ntBASIC8.88□□□□□ -0.99
Col1a1P11087 Gm42546-201ENSMUST00000201584 2592 ntBASIC8.88□□□□□ -0.99
Col1a1P11087 Gm26831-201ENSMUST00000181458 1380 ntBASIC8.88□□□□□ -0.99
Col1a1P11087 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC8.88□□□□□ -0.99
Col1a1P11087 Gm2a-201ENSMUST00000000608 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col1a1P11087 Gm37447-201ENSMUST00000195625 2928 ntBASIC8.88□□□□□ -0.99
Col1a1P11087 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Col1a1P11087 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Col1a1P11087 Ptpro-207ENSMUST00000203914 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col1a1P11087 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
Col1a1P11087 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col1a1P11087 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col1a1P11087 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col1a1P11087 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col1a1P11087 Gm15047-201ENSMUST00000118891 454 ntBASIC8.88□□□□□ -0.99
Col1a1P11087 Gm11320-201ENSMUST00000119434 463 ntBASIC8.88□□□□□ -0.99
Col1a1P11087 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC8.88□□□□□ -0.99
Col1a1P11087 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC8.88□□□□□ -0.99
Col1a1P11087 Gm12504-202ENSMUST00000148026 306 ntBASIC8.88□□□□□ -0.99
Col1a1P11087 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC8.88□□□□□ -0.99
Col1a1P11087 Gm24050-201ENSMUST00000158623 290 ntBASIC8.88□□□□□ -0.99
Col1a1P11087 Mir6244-201ENSMUST00000184156 117 ntBASIC8.88□□□□□ -0.99
Col1a1P11087 Gm29354-201ENSMUST00000187613 696 ntBASIC8.88□□□□□ -0.99
Col1a1P11087 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Col1a1P11087 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC8.88□□□□□ -0.99
Col1a1P11087 AC123920.1-201ENSMUST00000221449 384 ntBASIC8.88□□□□□ -0.99
Col1a1P11087 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC8.88□□□□□ -0.99
Col1a1P11087 Btn2a2-203ENSMUST00000110433 2370 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col1a1P11087 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC8.88□□□□□ -0.99
Col1a1P11087 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Col1a1P11087 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col1a1P11087 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC8.88□□□□□ -0.99
Col1a1P11087 Nedd4-209ENSMUST00000184450 3329 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Col1a1P11087 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms