Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TcraP01849 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TcraP01849 Gm18243-201ENSMUST00000220756 887 ntBASIC5.53□□□□□ -1.52
TcraP01849 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC5.53□□□□□ -1.52
TcraP01849 AV026068-218ENSMUST00000223980 575 ntBASIC5.53□□□□□ -1.52
TcraP01849 Trap1a-201ENSMUST00000054534 1178 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TcraP01849 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TcraP01849 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TcraP01849 Gm26264-201ENSMUST00000083278 159 ntBASIC5.53□□□□□ -1.52
TcraP01849 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TcraP01849 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TcraP01849 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TcraP01849 Gm12919-201ENSMUST00000119855 1594 ntBASIC5.53□□□□□ -1.52
TcraP01849 Gm28651-202ENSMUST00000227968 2693 ntBASIC5.53□□□□□ -1.52
TcraP01849 Asic5-202ENSMUST00000107736 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TcraP01849 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
TcraP01849 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TcraP01849 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TcraP01849 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TcraP01849 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TcraP01849 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TcraP01849 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
TcraP01849 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TcraP01849 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TcraP01849 Paip1-202ENSMUST00000109203 1525 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
TcraP01849 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TcraP01849 Gm38244-201ENSMUST00000191737 2586 ntBASIC5.53□□□□□ -1.52
TcraP01849 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC5.53□□□□□ -1.52
TcraP01849 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TcraP01849 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TcraP01849 Gm44231-201ENSMUST00000204106 4075 ntBASIC5.53□□□□□ -1.52
TcraP01849 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TcraP01849 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC5.53□□□□□ -1.52
TcraP01849 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TcraP01849 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TcraP01849 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC5.52□□□□□ -1.53
TcraP01849 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC5.52□□□□□ -1.53
TcraP01849 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC5.52□□□□□ -1.53
TcraP01849 Txndc16-204ENSMUST00000128484 2069 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
TcraP01849 Gm37483-201ENSMUST00000194382 1484 ntBASIC5.52□□□□□ -1.53
TcraP01849 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 CT025548.2-201ENSMUST00000226227 1329 ntBASIC5.52□□□□□ -1.53
TcraP01849 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TcraP01849 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TcraP01849 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 Gm38120-201ENSMUST00000195506 4642 ntBASIC5.52□□□□□ -1.53
TcraP01849 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TcraP01849 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 Gm25502-201ENSMUST00000104428 131 ntBASIC5.52□□□□□ -1.53
TcraP01849 E330017L17Rik-202ENSMUST00000139190 861 ntTSL 5 BASIC5.52□□□□□ -1.53
TcraP01849 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 Gm23533-201ENSMUST00000157540 245 ntBASIC5.52□□□□□ -1.53
TcraP01849 BC049715-202ENSMUST00000163640 744 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TcraP01849 5730435O14Rik-202ENSMUST00000170047 617 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 Gm8046-201ENSMUST00000172151 616 ntBASIC5.52□□□□□ -1.53
TcraP01849 Btnl5-ps-202ENSMUST00000173333 461 ntTSL 2 BASIC5.52□□□□□ -1.53
TcraP01849 Gm26623-201ENSMUST00000180911 850 ntTSL 5 BASIC5.52□□□□□ -1.53
TcraP01849 Gm7456-201ENSMUST00000182862 1011 ntBASIC5.52□□□□□ -1.53
TcraP01849 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC5.52□□□□□ -1.53
TcraP01849 Olfr1392-201ENSMUST00000189851 1018 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TcraP01849 Gm18797-201ENSMUST00000190809 1174 ntBASIC5.52□□□□□ -1.53
TcraP01849 Gm37012-201ENSMUST00000194991 1078 ntBASIC5.52□□□□□ -1.53
TcraP01849 1700081B01Rik-202ENSMUST00000197543 648 ntTSL 3 BASIC5.52□□□□□ -1.53
TcraP01849 Gm2939-201ENSMUST00000198496 478 ntBASIC5.52□□□□□ -1.53
TcraP01849 Gm5981-201ENSMUST00000199912 487 ntBASIC5.52□□□□□ -1.53
TcraP01849 Olfr326-ps1-201ENSMUST00000204790 392 ntBASIC5.52□□□□□ -1.53
TcraP01849 Gm44712-201ENSMUST00000206250 1076 ntBASIC5.52□□□□□ -1.53
TcraP01849 D830044I16Rik-205ENSMUST00000206296 845 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TcraP01849 Gm44833-201ENSMUST00000208368 331 ntBASIC5.52□□□□□ -1.53
TcraP01849 Olfr61-204ENSMUST00000211685 1212 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
TcraP01849 CT030709.1-201ENSMUST00000214443 443 ntTSL 5 BASIC5.52□□□□□ -1.53
TcraP01849 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC5.52□□□□□ -1.53
TcraP01849 Olfr977-ps1-201ENSMUST00000217438 943 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TcraP01849 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC5.52□□□□□ -1.53
TcraP01849 AC122354.1-201ENSMUST00000222328 702 ntTSL 5 BASIC5.52□□□□□ -1.53
TcraP01849 AC211878.7-201ENSMUST00000222851 661 ntBASIC5.52□□□□□ -1.53
TcraP01849 AC154528.3-201ENSMUST00000228011 679 ntBASIC5.52□□□□□ -1.53
TcraP01849 AC114585.2-203ENSMUST00000228400 339 ntBASIC5.52□□□□□ -1.53
TcraP01849 Tarm1-201ENSMUST00000065703 892 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 2700046A07Rik-202ENSMUST00000067450 2101 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TcraP01849 Tatdn3-202ENSMUST00000085633 1089 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 Gm16410-201ENSMUST00000094550 774 ntBASIC5.52□□□□□ -1.53
TcraP01849 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.52□□□□□ -1.53
TcraP01849 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TcraP01849 Gm37984-201ENSMUST00000191641 3733 ntBASIC5.52□□□□□ -1.53
TcraP01849 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TcraP01849 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms