Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Gm18830-201ENSMUST00000199036 1396 ntBASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Gm44289-201ENSMUST00000204144 1390 ntBASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Crebbp-205ENSMUST00000205765 7749 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 Calhm2-202ENSMUST00000140512 3377 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 L1cam-203ENSMUST00000114430 5126 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc180J3QNE4 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Gm22231-201ENSMUST00000101027 73 ntBASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Gm15007-201ENSMUST00000119982 710 ntBASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Gm11585-201ENSMUST00000120901 569 ntBASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Gm13221-201ENSMUST00000121712 430 ntBASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Trub1-202ENSMUST00000026073 3795 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Lin54-202ENSMUST00000123572 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Dusp3-201ENSMUST00000003612 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Synpo2-202ENSMUST00000106426 7063 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Col28a1-201ENSMUST00000115537 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Gm11443-201ENSMUST00000118790 479 ntBASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Gm9378-201ENSMUST00000120315 471 ntBASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Gm12929-201ENSMUST00000122406 370 ntBASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Gm24011-201ENSMUST00000157732 268 ntBASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 AC123533.2-201ENSMUST00000228176 375 ntBASIC13.82□□□□□ -0.2
Ccdc180J3QNE4 Gm37200-201ENSMUST00000193689 2172 ntBASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Gm10307-201ENSMUST00000189839 1337 ntBASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Gm44093-201ENSMUST00000204381 1802 ntBASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Sin3a-207ENSMUST00000168502 4899 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Gm24157-201ENSMUST00000175265 111 ntBASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Gm37260-201ENSMUST00000193748 1251 ntBASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 AC154904.1-201ENSMUST00000219510 312 ntBASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 CT009550.2-201ENSMUST00000228851 399 ntBASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Gpr87-201ENSMUST00000056898 1080 ntBASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 AC154747.4-203ENSMUST00000225893 1384 ntBASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc180J3QNE4 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Npr3-204ENSMUST00000228489 1969 ntBASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Gm42700-201ENSMUST00000199071 2437 ntBASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Gm37499-201ENSMUST00000194683 3478 ntBASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Gm5402-201ENSMUST00000119588 1618 ntBASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Gm12879-201ENSMUST00000120003 1182 ntBASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Gm12593-201ENSMUST00000120981 743 ntBASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Gm6428-201ENSMUST00000161062 345 ntBASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Gm28801-201ENSMUST00000188761 449 ntBASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Gm42782-201ENSMUST00000197286 522 ntBASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Gm44258-201ENSMUST00000204925 301 ntBASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Gm5446-201ENSMUST00000091762 784 ntBASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc180J3QNE4 Gm43196-201ENSMUST00000201762 2114 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms