Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm3774-201ENSMUST00000209773 435 ntBASIC9.9□□□□□ -0.82
Ube3bQ9ES34 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC9.9□□□□□ -0.82
Ube3bQ9ES34 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ube3bQ9ES34 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC9.9□□□□□ -0.82
Ube3bQ9ES34 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC9.9□□□□□ -0.82
Ube3bQ9ES34 Gm5173-201ENSMUST00000219616 950 ntBASIC9.9□□□□□ -0.82
Ube3bQ9ES34 Gm8153-201ENSMUST00000219844 952 ntBASIC9.9□□□□□ -0.82
Ube3bQ9ES34 AC151982.1-201ENSMUST00000223546 464 ntBASIC9.9□□□□□ -0.82
Ube3bQ9ES34 Rab3b-201ENSMUST00000003502 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ube3bQ9ES34 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Ube3bQ9ES34 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Ube3bQ9ES34 Gm25475-201ENSMUST00000082825 180 ntBASIC9.9□□□□□ -0.82
Ube3bQ9ES34 Slc2a9-205ENSMUST00000129099 3462 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Ube3bQ9ES34 Gm10997-201ENSMUST00000210294 1500 ntBASIC9.9□□□□□ -0.82
Ube3bQ9ES34 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC9.9□□□□□ -0.82
Ube3bQ9ES34 Tex24-201ENSMUST00000095375 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ube3bQ9ES34 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ube3bQ9ES34 Mgam2-ps-203ENSMUST00000216691 1709 ntTSL 5 BASIC9.9□□□□□ -0.83
Ube3bQ9ES34 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.83
Ube3bQ9ES34 Tro-205ENSMUST00000151403 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ube3bQ9ES34 Gm9839-201ENSMUST00000195252 1437 ntBASIC9.9□□□□□ -0.83
Ube3bQ9ES34 Ms4a6d-201ENSMUST00000025582 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ube3bQ9ES34 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ube3bQ9ES34 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC9.9□□□□□ -0.83
Ube3bQ9ES34 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC9.9□□□□□ -0.83
Ube3bQ9ES34 9430073C21Rik-201ENSMUST00000145346 2173 ntTSL 2 BASIC9.9□□□□□ -0.83
Ube3bQ9ES34 Gm7435-202ENSMUST00000216003 2424 ntBASIC9.9□□□□□ -0.83
Ube3bQ9ES34 Gm19589-201ENSMUST00000189394 2623 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Kdm5a-201ENSMUST00000005108 10944 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Ep400-203ENSMUST00000112435 10420 ntTSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Opcml-202ENSMUST00000115243 6676 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Exosc10-201ENSMUST00000017408 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 AC125074.1-201ENSMUST00000227970 1331 ntBASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 AC160637.1-201ENSMUST00000214037 3887 ntBASIC9.89□□□□□ -0.83
Ube3bQ9ES34 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Bdp1-204ENSMUST00000109379 7567 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Mef2a-204ENSMUST00000107476 4759 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Churc1-202ENSMUST00000110399 535 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm14624-201ENSMUST00000117746 192 ntBASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm15062-201ENSMUST00000120567 367 ntBASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm9159-201ENSMUST00000120661 566 ntBASIC9.89□□□□□ -0.83
Ube3bQ9ES34 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Fam229b-203ENSMUST00000125042 707 ntTSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm25265-201ENSMUST00000158520 347 ntBASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm16596-201ENSMUST00000180576 604 ntTSL 3 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm37187-201ENSMUST00000193425 341 ntBASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm42431-201ENSMUST00000196880 323 ntBASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm5418-201ENSMUST00000206932 528 ntBASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 AC122372.1-201ENSMUST00000215344 280 ntBASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 AC211878.6-201ENSMUST00000221896 358 ntBASIC9.89□□□□□ -0.83
Ube3bQ9ES34 CT009515.2-201ENSMUST00000226126 736 ntBASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Mir185-201ENSMUST00000083530 65 ntBASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Olfr1160-201ENSMUST00000099839 960 ntBASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Il1bos-202ENSMUST00000156601 2425 ntTSL 2 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm38910-201ENSMUST00000204630 2448 ntBASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm28138-201ENSMUST00000186250 2167 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm29270-201ENSMUST00000188071 2167 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm29392-201ENSMUST00000189429 2167 ntTSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm29252-201ENSMUST00000189869 2167 ntTSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Gm5316-202ENSMUST00000185734 3096 ntBASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Zfp607b-201ENSMUST00000076421 1947 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Kdm4a-201ENSMUST00000050288 3279 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Klhl5-201ENSMUST00000101191 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Cacna1d-202ENSMUST00000112250 8688 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Ctnnd1-210ENSMUST00000111684 6021 ntTSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Zfp961-201ENSMUST00000109997 2713 ntAPPRIS P2 TSL 2 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Baz2a-203ENSMUST00000217851 8385 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Vwa3b-203ENSMUST00000117172 1636 ntAPPRIS P5 TSL 2 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Cacna1d-201ENSMUST00000112249 8068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Ube3bQ9ES34 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ube3bQ9ES34 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Ube3bQ9ES34 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ube3bQ9ES34 Cass4-202ENSMUST00000103073 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ube3bQ9ES34 Gm26649-201ENSMUST00000181595 3196 ntTSL 5 BASIC9.88□□□□□ -0.83
Ube3bQ9ES34 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms