Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC9.02□□□□□ -0.96
Vps53Q8CCB4 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC9.02□□□□□ -0.96
Vps53Q8CCB4 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Vps53Q8CCB4 Bcas3-204ENSMUST00000108056 2925 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Vps53Q8CCB4 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Vps53Q8CCB4 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 D130007C19Rik-201ENSMUST00000067277 1505 ntBASIC9.02□□□□□ -0.97
Vps53Q8CCB4 AC120163.1-201ENSMUST00000228618 1680 ntBASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Gm22927-201ENSMUST00000104268 131 ntBASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Gm12460-201ENSMUST00000117147 357 ntBASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Gm42584-201ENSMUST00000201404 220 ntBASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Gm18484-201ENSMUST00000204389 991 ntBASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Gm18207-201ENSMUST00000205486 526 ntBASIC9.02□□□□□ -0.97
Vps53Q8CCB4 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 AC155259.1-201ENSMUST00000214794 477 ntBASIC9.02□□□□□ -0.97
Vps53Q8CCB4 AC122360.1-201ENSMUST00000217737 624 ntBASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Gm18629-201ENSMUST00000222496 884 ntBASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Gm6166-201ENSMUST00000098689 409 ntBASIC9.02□□□□□ -0.97
Vps53Q8CCB4 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Gm44916-201ENSMUST00000208664 2194 ntBASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Vps53Q8CCB4 Rian-209ENSMUST00000182406 3476 ntBASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 AC105958.1-201ENSMUST00000214783 2144 ntBASIC9.01□□□□□ -0.97
Vps53Q8CCB4 AC126028.1-201ENSMUST00000226218 2123 ntBASIC9.01□□□□□ -0.97
Vps53Q8CCB4 AC168056.4-201ENSMUST00000223835 2567 ntBASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 n-R5s1-201ENSMUST00000101925 119 ntBASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Gm8688-201ENSMUST00000118240 969 ntBASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Gm12098-201ENSMUST00000118277 508 ntBASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Gm16330-201ENSMUST00000128324 297 ntBASIC9.01□□□□□ -0.97
Vps53Q8CCB4 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Gm27435-201ENSMUST00000183588 88 ntBASIC9.01□□□□□ -0.97
Vps53Q8CCB4 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Gm43560-201ENSMUST00000198100 773 ntBASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Gm17995-201ENSMUST00000209266 530 ntBASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Gm8804-201ENSMUST00000212292 798 ntBASIC9.01□□□□□ -0.97
Vps53Q8CCB4 AC154307.1-201ENSMUST00000214799 90 ntBASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Gm26264-201ENSMUST00000083278 159 ntBASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Vps53Q8CCB4 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC9.01□□□□□ -0.97
Vps53Q8CCB4 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms