Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Gm11338-201ENSMUST00000120086 1160 ntBASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Gm12970-201ENSMUST00000134911 581 ntTSL 3 BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Gm17786-201ENSMUST00000182000 427 ntBASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Gm29008-201ENSMUST00000189387 298 ntBASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Gm44356-201ENSMUST00000196731 111 ntBASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Olfr471-201ENSMUST00000210091 936 ntBASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Gm1559-201ENSMUST00000219596 3117 ntTSL 3 BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Osbpl9-218ENSMUST00000162787 2408 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Gm12258-201ENSMUST00000093768 2524 ntBASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 4930571K23Rik-201ENSMUST00000166958 2153 ntBASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 1700024J04Rik-201ENSMUST00000093146 1821 ntBASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Kcnip4-204ENSMUST00000166924 2257 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b2Q3UJB0 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Tfdp1-203ENSMUST00000209396 2421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Gm6284-201ENSMUST00000209609 4287 ntBASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Hist2h2be-201ENSMUST00000090781 2620 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Apol11b-201ENSMUST00000166623 2057 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Pitpnm2os1-201ENSMUST00000161697 1618 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Orc1-201ENSMUST00000102744 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Gm44848-201ENSMUST00000207808 3234 ntBASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 A730065G17Rik-201ENSMUST00000217082 3335 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Gm18637-201ENSMUST00000217665 1900 ntBASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Gm10177-201ENSMUST00000160052 444 ntBASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Gm26703-202ENSMUST00000181506 2982 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Mirg-204ENSMUST00000182185 3822 ntTSL 5 BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Gm42708-201ENSMUST00000196332 905 ntBASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Lrp1b-212ENSMUST00000204204 798 ntTSL 2 BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 AC159267.1-201ENSMUST00000226702 678 ntBASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Limch1-203ENSMUST00000117601 3157 ntTSL 5 BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Phactr4-203ENSMUST00000102568 4614 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Gm17821-201ENSMUST00000223448 1693 ntBASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Gm8428-201ENSMUST00000159919 1784 ntBASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 AC170188.1-201ENSMUST00000223710 1963 ntBASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Fut10-203ENSMUST00000161502 3527 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Olfr97-203ENSMUST00000213328 2168 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Sf3b2Q3UJB0 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Cd22-203ENSMUST00000186154 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Sap130-201ENSMUST00000025109 4015 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Rngtt-202ENSMUST00000108153 4157 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Arpp21-201ENSMUST00000035085 3254 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 1600012P17Rik-201ENSMUST00000062159 2475 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 AC166159.1-201ENSMUST00000227154 1380 ntBASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Gm25093-201ENSMUST00000103993 132 ntBASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Gm16026-205ENSMUST00000162923 641 ntBASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 C030010L15Rik-201ENSMUST00000181465 715 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Mir7020-201ENSMUST00000183787 70 ntBASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Gm29562-201ENSMUST00000190113 904 ntBASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Gm38079-201ENSMUST00000195603 154 ntBASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Gm4525-201ENSMUST00000198831 254 ntBASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC10.07□□□□□ -0.8
Sf3b2Q3UJB0 AC158981.1-201ENSMUST00000226943 1205 ntBASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms