Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm43679-201ENSMUST00000197051 3677 ntBASIC8.75□□□□□ -1.01
Hmgb1P63158 Gm46199-201ENSMUST00000220373 1693 ntBASIC8.75□□□□□ -1.01
Hmgb1P63158 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Hmgb1P63158 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hmgb1P63158 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm45088-201ENSMUST00000207066 1408 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm43606-201ENSMUST00000195938 3556 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm5402-201ENSMUST00000119588 1618 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC8.74□□□□□ -1.01
Hmgb1P63158 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC8.74□□□□□ -1.01
Hmgb1P63158 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC8.74□□□□□ -1.01
Hmgb1P63158 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm13252-201ENSMUST00000119355 321 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm11585-201ENSMUST00000120901 569 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 4930455G09Rik-201ENSMUST00000126231 630 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm371-201ENSMUST00000142240 1245 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC8.74□□□□□ -1.01
Hmgb1P63158 Cul1-203ENSMUST00000143941 530 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Hmgb1P63158 Snhg7-201ENSMUST00000181621 139 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm9167-201ENSMUST00000182469 962 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm5839-201ENSMUST00000182835 1007 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC8.74□□□□□ -1.01
Hmgb1P63158 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC8.74□□□□□ -1.01
Hmgb1P63158 AC155259.1-201ENSMUST00000214794 477 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm8767-201ENSMUST00000215786 1070 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm18871-201ENSMUST00000218655 745 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC8.74□□□□□ -1.01
Hmgb1P63158 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Hmgb1P63158 AC123738.1-201ENSMUST00000224796 773 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm21957-201ENSMUST00000073056 438 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Olfr304-201ENSMUST00000077210 1002 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Hmgb1P63158 Mir146b-201ENSMUST00000093619 109 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm6304-201ENSMUST00000096579 447 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hmgb1P63158 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm12394-201ENSMUST00000107981 3348 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Hmgb1P63158 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm34294-201ENSMUST00000191912 4263 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Hmgb1P63158 Tmem161b-206ENSMUST00000225069 2414 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm43363-201ENSMUST00000201590 2647 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hmgb1P63158 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hmgb1P63158 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm42597-201ENSMUST00000196663 1544 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm37151-201ENSMUST00000194631 5007 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 Gm45534-201ENSMUST00000211449 2339 ntBASIC8.74□□□□□ -1.01
Hmgb1P63158 AC162467.2-201ENSMUST00000219397 2571 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb1P63158 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb1P63158 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb1P63158 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC8.73□□□□□ -1.01
Hmgb1P63158 Zranb1-201ENSMUST00000033265 2210 ntAPPRIS P2 TSL 2 BASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm42671-201ENSMUST00000198013 1604 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb1P63158 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Hmgb1P63158 Rnase13-201ENSMUST00000089771 1412 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Hmgb1P63158 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Hmgb1P63158 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Hmgb1P63158 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb1P63158 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb1P63158 Rps19-ps2-201ENSMUST00000100614 438 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 Hist1h4f-201ENSMUST00000102971 391 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Hmgb1P63158 Hist1h4h-201ENSMUST00000102972 470 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm24335-201ENSMUST00000104211 132 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 Snord65-201ENSMUST00000104269 72 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm11241-201ENSMUST00000117371 896 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm6382-201ENSMUST00000118873 942 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm9392-201ENSMUST00000119337 554 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm12307-201ENSMUST00000120581 590 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 Fam187b-202ENSMUST00000128384 1244 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm15520-201ENSMUST00000132097 1203 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC8.73□□□□□ -1.01
Hmgb1P63158 BC021767-202ENSMUST00000136988 905 ntTSL 3 BASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm16585-201ENSMUST00000161442 610 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm4868-201ENSMUST00000164138 789 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 Rps19-ps1-201ENSMUST00000168472 438 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm27435-201ENSMUST00000183588 88 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm31243-201ENSMUST00000197498 632 ntTSL 2 BASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm44422-201ENSMUST00000204142 1025 ntBASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC8.73□□□□□ -1.01
Hmgb1P63158 5033426E14Rik-201ENSMUST00000212462 783 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb1P63158 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb1P63158 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC8.73□□□□□ -1.01
Hmgb1P63158 AC160931.1-201ENSMUST00000223298 413 ntTSL 3 BASIC8.73□□□□□ -1.01
Hmgb1P63158 1700010B08Rik-201ENSMUST00000073081 899 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Hmgb1P63158 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Hmgb1P63158 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms