Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Mamdc4-201ENSMUST00000095117 3990 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
NcanP55066 Tbc1d24-204ENSMUST00000167791 4383 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Zfp354a-203ENSMUST00000109119 2078 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
NcanP55066 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Ctnnd1-209ENSMUST00000111678 5870 ntTSL 5 BASIC8.19□□□□□ -1.1
NcanP55066 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
NcanP55066 Gm24709-201ENSMUST00000104123 132 ntBASIC8.19□□□□□ -1.1
NcanP55066 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
NcanP55066 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Gm11920-201ENSMUST00000118491 563 ntBASIC8.19□□□□□ -1.1
NcanP55066 Gm13252-201ENSMUST00000119355 321 ntBASIC8.19□□□□□ -1.1
NcanP55066 Gm14824-201ENSMUST00000119421 737 ntBASIC8.19□□□□□ -1.1
NcanP55066 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC8.19□□□□□ -1.1
NcanP55066 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC8.19□□□□□ -1.1
NcanP55066 Gm23386-201ENSMUST00000158585 144 ntBASIC8.19□□□□□ -1.1
NcanP55066 Gm27854-201ENSMUST00000175578 244 ntBASIC8.19□□□□□ -1.1
NcanP55066 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC8.19□□□□□ -1.1
NcanP55066 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC8.19□□□□□ -1.1
NcanP55066 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC8.19□□□□□ -1.1
NcanP55066 Gm44422-201ENSMUST00000204142 1025 ntBASIC8.19□□□□□ -1.1
NcanP55066 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC8.19□□□□□ -1.1
NcanP55066 AC155709.1-201ENSMUST00000218794 162 ntBASIC8.19□□□□□ -1.1
NcanP55066 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
NcanP55066 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
NcanP55066 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Ap3b2-201ENSMUST00000082090 3804 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
NcanP55066 Trmt13-201ENSMUST00000041524 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC8.19□□□□□ -1.1
NcanP55066 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC8.19□□□□□ -1.1
NcanP55066 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Trak2-205ENSMUST00000174120 2636 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
NcanP55066 Cenpl-201ENSMUST00000028035 4883 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Diaph1-203ENSMUST00000115629 5416 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
NcanP55066 Tmem174-201ENSMUST00000050389 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Syt11-201ENSMUST00000090945 4567 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Patj-202ENSMUST00000041284 7340 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
NcanP55066 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
NcanP55066 Tktl1-201ENSMUST00000010127 2473 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Zfp148-201ENSMUST00000089677 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NcanP55066 Gm31983-202ENSMUST00000210553 3155 ntTSL 5 BASIC8.18□□□□□ -1.1
NcanP55066 Gm6284-201ENSMUST00000209609 4287 ntBASIC8.18□□□□□ -1.1
NcanP55066 Zmym5-203ENSMUST00000173954 5357 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NcanP55066 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
NcanP55066 Atf7-203ENSMUST00000169033 2165 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NcanP55066 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NcanP55066 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
NcanP55066 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NcanP55066 Olfr923-203ENSMUST00000213619 2846 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
NcanP55066 Tirap-201ENSMUST00000175765 4589 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NcanP55066 Olfr117-203ENSMUST00000215414 3498 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
NcanP55066 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
NcanP55066 Gm42515-201ENSMUST00000199936 3583 ntBASIC8.18□□□□□ -1.1
NcanP55066 Pikfyve-202ENSMUST00000097707 6641 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
NcanP55066 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NcanP55066 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC8.18□□□□□ -1.1
NcanP55066 Gm11984-201ENSMUST00000118142 766 ntBASIC8.18□□□□□ -1.1
NcanP55066 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
NcanP55066 Gm12477-201ENSMUST00000121221 571 ntBASIC8.18□□□□□ -1.1
NcanP55066 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NcanP55066 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC8.18□□□□□ -1.1
NcanP55066 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC8.18□□□□□ -1.1
NcanP55066 Gm25117-201ENSMUST00000157194 144 ntBASIC8.18□□□□□ -1.1
NcanP55066 Gm23799-201ENSMUST00000175559 120 ntBASIC8.18□□□□□ -1.1
NcanP55066 C030010L15Rik-201ENSMUST00000181465 715 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NcanP55066 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC8.18□□□□□ -1.1
NcanP55066 Gm18593-201ENSMUST00000200754 1139 ntBASIC8.18□□□□□ -1.1
NcanP55066 Gm8930-201ENSMUST00000201693 768 ntBASIC8.18□□□□□ -1.1
NcanP55066 Gm5418-201ENSMUST00000206932 528 ntBASIC8.18□□□□□ -1.1
NcanP55066 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
NcanP55066 AC151901.1-201ENSMUST00000218274 180 ntBASIC8.18□□□□□ -1.1
NcanP55066 AC154382.1-201ENSMUST00000220958 1282 ntBASIC8.18□□□□□ -1.1
NcanP55066 Gm18620-201ENSMUST00000222295 324 ntBASIC8.18□□□□□ -1.1
NcanP55066 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NcanP55066 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NcanP55066 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
NcanP55066 Mir27a-201ENSMUST00000083510 87 ntBASIC8.18□□□□□ -1.1
NcanP55066 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
NcanP55066 Adgrl3-218ENSMUST00000122037 4649 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
NcanP55066 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
NcanP55066 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NcanP55066 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NcanP55066 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC8.18□□□□□ -1.1
NcanP55066 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NcanP55066 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NcanP55066 Bcas3-204ENSMUST00000108056 2925 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NcanP55066 Gm10101-202ENSMUST00000181311 2919 ntBASIC8.18□□□□□ -1.1
NcanP55066 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NcanP55066 Nbr1-202ENSMUST00000103098 4654 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
NcanP55066 Gm43544-201ENSMUST00000196474 2472 ntBASIC8.18□□□□□ -1.1
NcanP55066 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC8.18□□□□□ -1.1
NcanP55066 Olfr366-202ENSMUST00000214897 5333 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
NcanP55066 Arhgef3-201ENSMUST00000049206 3585 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 4931431C16Rik-201ENSMUST00000124643 2735 ntTSL 2 BASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms