Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC9.73□□□□□ -0.85
Msh6P54276 Gm23187-201ENSMUST00000175746 86 ntBASIC9.73□□□□□ -0.85
Msh6P54276 Gm7481-201ENSMUST00000182020 995 ntBASIC9.73□□□□□ -0.85
Msh6P54276 Pea15b-201ENSMUST00000182806 387 ntBASIC9.73□□□□□ -0.85
Msh6P54276 Gm17833-201ENSMUST00000197629 1065 ntBASIC9.73□□□□□ -0.85
Msh6P54276 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC9.73□□□□□ -0.85
Msh6P54276 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 CT009711.2-202ENSMUST00000224538 973 ntBASIC9.73□□□□□ -0.85
Msh6P54276 AC158981.1-201ENSMUST00000226943 1205 ntBASIC9.73□□□□□ -0.85
Msh6P54276 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Gm10247-201ENSMUST00000090395 333 ntBASIC9.73□□□□□ -0.85
Msh6P54276 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC9.73□□□□□ -0.85
Msh6P54276 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Msh6P54276 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Msh6P54276 Plekhg1-202ENSMUST00000120274 7369 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Msh6P54276 Rreb1-203ENSMUST00000110238 7437 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Msh6P54276 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Msh6P54276 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Msh6P54276 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Msh6P54276 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Msh6P54276 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Msh6P54276 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Msh6P54276 Gm29113-201ENSMUST00000185991 3432 ntBASIC9.72□□□□□ -0.85
Msh6P54276 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Msh6P54276 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC9.72□□□□□ -0.85
Msh6P54276 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Msh6P54276 Gm5228-201ENSMUST00000117186 357 ntBASIC9.72□□□□□ -0.85
Msh6P54276 Gm12375-201ENSMUST00000119331 921 ntBASIC9.72□□□□□ -0.85
Msh6P54276 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Msh6P54276 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Msh6P54276 Gm26321-201ENSMUST00000157740 242 ntBASIC9.72□□□□□ -0.85
Msh6P54276 Gm26353-201ENSMUST00000158224 255 ntBASIC9.72□□□□□ -0.85
Msh6P54276 Gm25692-201ENSMUST00000175444 125 ntBASIC9.72□□□□□ -0.85
Msh6P54276 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC9.72□□□□□ -0.85
Msh6P54276 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC9.72□□□□□ -0.85
Msh6P54276 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC9.72□□□□□ -0.85
Msh6P54276 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC9.72□□□□□ -0.85
Msh6P54276 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC9.72□□□□□ -0.85
Msh6P54276 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Msh6P54276 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC9.72□□□□□ -0.85
Msh6P54276 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC9.72□□□□□ -0.85
Msh6P54276 CT025685.1-201ENSMUST00000213716 150 ntBASIC9.72□□□□□ -0.85
Msh6P54276 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Msh6P54276 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC9.72□□□□□ -0.85
Msh6P54276 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC9.72□□□□□ -0.85
Msh6P54276 AC069562.1-201ENSMUST00000224206 434 ntBASIC9.72□□□□□ -0.85
Msh6P54276 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Msh6P54276 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Msh6P54276 Ttf2-201ENSMUST00000076941 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Msh6P54276 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Msh6P54276 Rtl5-201ENSMUST00000113631 4653 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Msh6P54276 AC154171.3-201ENSMUST00000224519 2505 ntBASIC9.72□□□□□ -0.85
Msh6P54276 Gm44423-201ENSMUST00000203746 3158 ntBASIC9.72□□□□□ -0.85
Msh6P54276 Abce1-201ENSMUST00000080536 3793 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Msh6P54276 Ap3b2-201ENSMUST00000082090 3804 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Msh6P54276 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Msh6P54276 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Msh6P54276 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Msh6P54276 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Msh6P54276 Gm42576-201ENSMUST00000202336 2846 ntBASIC9.71□□□□□ -0.85
Msh6P54276 Gm10259-201ENSMUST00000091289 1590 ntBASIC9.71□□□□□ -0.85
Msh6P54276 Pik3r4-210ENSMUST00000191268 4756 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Msh6P54276 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Msh6P54276 Gm5402-201ENSMUST00000119588 1618 ntBASIC9.71□□□□□ -0.85
Msh6P54276 Gm37159-201ENSMUST00000192720 3605 ntBASIC9.71□□□□□ -0.85
Msh6P54276 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC9.71□□□□□ -0.85
Msh6P54276 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Msh6P54276 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Msh6P54276 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Msh6P54276 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Msh6P54276 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Msh6P54276 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Msh6P54276 Gm15209-201ENSMUST00000117703 400 ntBASIC9.71□□□□□ -0.86
Msh6P54276 Gm9311-201ENSMUST00000118042 1269 ntBASIC9.71□□□□□ -0.86
Msh6P54276 Gm11416-201ENSMUST00000119111 863 ntBASIC9.71□□□□□ -0.86
Msh6P54276 Gm11474-201ENSMUST00000120814 277 ntBASIC9.71□□□□□ -0.86
Msh6P54276 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC9.71□□□□□ -0.86
Msh6P54276 Gm24682-201ENSMUST00000158764 137 ntBASIC9.71□□□□□ -0.86
Msh6P54276 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC9.71□□□□□ -0.86
Msh6P54276 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Msh6P54276 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Msh6P54276 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Msh6P54276 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC9.71□□□□□ -0.86
Msh6P54276 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC9.71□□□□□ -0.86
Msh6P54276 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC9.71□□□□□ -0.86
Msh6P54276 Gm4856-201ENSMUST00000192696 1091 ntBASIC9.71□□□□□ -0.86
Msh6P54276 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC9.71□□□□□ -0.86
Msh6P54276 Gm8479-201ENSMUST00000203825 718 ntBASIC9.71□□□□□ -0.86
Msh6P54276 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC9.71□□□□□ -0.86
Msh6P54276 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC9.71□□□□□ -0.86
Msh6P54276 Gm7972-201ENSMUST00000208434 1137 ntBASIC9.71□□□□□ -0.86
Msh6P54276 Gm45100-201ENSMUST00000209153 391 ntBASIC9.71□□□□□ -0.86
Msh6P54276 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC9.71□□□□□ -0.86
Msh6P54276 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC9.71□□□□□ -0.86
Msh6P54276 AC151904.5-201ENSMUST00000218975 549 ntBASIC9.71□□□□□ -0.86
Msh6P54276 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms