Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Klhl20-201ENSMUST00000111611 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Gm46199-201ENSMUST00000220373 1693 ntBASIC8.37□□□□□ -1.07
Sox1P53783 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Sox1P53783 Gm32335-201ENSMUST00000216896 2948 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Ints2-201ENSMUST00000018212 5906 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Itgbl1-201ENSMUST00000049681 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Meis2-203ENSMUST00000102538 2810 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Rims2-201ENSMUST00000042917 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 AC113059.1-201ENSMUST00000181185 2777 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Olfr545-202ENSMUST00000216116 3496 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Sox1P53783 AC160413.2-201ENSMUST00000217790 2280 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Gm28485-201ENSMUST00000185300 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Gm28422-201ENSMUST00000186112 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Gm29447-201ENSMUST00000186407 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Gm29628-201ENSMUST00000187206 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Gm28316-201ENSMUST00000187576 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Gm29313-201ENSMUST00000187866 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Gm28252-201ENSMUST00000188457 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Gm28950-203ENSMUST00000188826 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Gm29303-201ENSMUST00000189215 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Gm28220-201ENSMUST00000189607 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Gm29342-202ENSMUST00000189689 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Gm29116-202ENSMUST00000189963 1500 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Gm29081-203ENSMUST00000190140 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Gm28726-201ENSMUST00000190994 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Gm29386-203ENSMUST00000191185 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Gm33954-202ENSMUST00000195188 1500 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Lrrc55-202ENSMUST00000111601 2900 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Myof-202ENSMUST00000172095 7094 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Gm25757-201ENSMUST00000103986 123 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Gm22953-201ENSMUST00000116724 101 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Gm15778-201ENSMUST00000118469 608 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Gm14103-201ENSMUST00000119075 366 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Gm11850-201ENSMUST00000119679 479 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Gm6798-201ENSMUST00000119961 360 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Gm11350-201ENSMUST00000121436 870 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Gm12920-201ENSMUST00000121818 1186 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Gm26025-201ENSMUST00000158655 271 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Mir6971-201ENSMUST00000183497 63 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC8.36□□□□□ -1.07
Sox1P53783 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Gm5541-201ENSMUST00000193248 1113 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Mir703-201ENSMUST00000197105 109 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Gm7554-201ENSMUST00000202282 574 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC8.36□□□□□ -1.07
Sox1P53783 Gm7394-201ENSMUST00000209138 1032 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC8.36□□□□□ -1.07
Sox1P53783 AC125190.2-201ENSMUST00000221160 497 ntBASIC8.36□□□□□ -1.07
Sox1P53783 AC159203.1-201ENSMUST00000222039 769 ntBASIC8.36□□□□□ -1.07
Sox1P53783 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Lcn2-201ENSMUST00000050785 915 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Gm22748-201ENSMUST00000082493 136 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Gm24035-201ENSMUST00000082867 107 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Sox1P53783 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Sox1P53783 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC8.36□□□□□ -1.07
Sox1P53783 4932438H23Rik-202ENSMUST00000114076 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Ap1b1-202ENSMUST00000101613 3735 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 AC122197.1-201ENSMUST00000220281 2142 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 CT025645.1-201ENSMUST00000222760 4322 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Kdm5a-201ENSMUST00000005108 10944 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Sox1P53783 Gm8314-201ENSMUST00000208964 1858 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Olfr1110-202ENSMUST00000152758 3159 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Sox1P53783 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Prox2-201ENSMUST00000110249 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sox1P53783 Gm38383-201ENSMUST00000194131 2660 ntBASIC8.36□□□□□ -1.07
Sox1P53783 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC8.35□□□□□ -1.07
Sox1P53783 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Sox1P53783 Oog4-201ENSMUST00000061277 1981 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 9530053A07Rik-204ENSMUST00000150948 7895 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Sox1P53783 Ddx5-201ENSMUST00000021062 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sox1P53783 Gm12430-201ENSMUST00000121539 1322 ntBASIC8.35□□□□□ -1.07
Sox1P53783 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC8.35□□□□□ -1.07
Sox1P53783 Btk-202ENSMUST00000113213 2121 ntTSL 5 BASIC8.35□□□□□ -1.07
Sox1P53783 Bank1-205ENSMUST00000198206 2538 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Sox1P53783 Hivep2-201ENSMUST00000015645 9763 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms