Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC9.98□□□□□ -0.81
Col18a1P39061 Kcnma1-210ENSMUST00000179836 3177 ntTSL 5 BASIC9.98□□□□□ -0.81
Col18a1P39061 Prepl-201ENSMUST00000072406 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Nt5dc1-201ENSMUST00000047885 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.98□□□□□ -0.81
Col18a1P39061 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Nudt13-201ENSMUST00000022343 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Col18a1P39061 Rnf19a-201ENSMUST00000022890 4277 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC9.98□□□□□ -0.81
Col18a1P39061 Utp6-201ENSMUST00000043152 3877 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Cd101-201ENSMUST00000147399 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Col18a1P39061 Gm5601-201ENSMUST00000118909 972 ntBASIC9.98□□□□□ -0.81
Col18a1P39061 Trav8-2-201ENSMUST00000130122 337 ntBASIC9.98□□□□□ -0.81
Col18a1P39061 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC9.98□□□□□ -0.81
Col18a1P39061 Gm23756-201ENSMUST00000157582 114 ntBASIC9.98□□□□□ -0.81
Col18a1P39061 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC9.98□□□□□ -0.81
Col18a1P39061 Gm9286-201ENSMUST00000173586 508 ntBASIC9.98□□□□□ -0.81
Col18a1P39061 Gm20702-201ENSMUST00000176181 460 ntBASIC9.98□□□□□ -0.81
Col18a1P39061 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Col18a1P39061 Gm43560-201ENSMUST00000198100 773 ntBASIC9.98□□□□□ -0.81
Col18a1P39061 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC9.98□□□□□ -0.81
Col18a1P39061 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC9.98□□□□□ -0.81
Col18a1P39061 Gm10126-201ENSMUST00000221732 168 ntBASIC9.98□□□□□ -0.81
Col18a1P39061 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Col18a1P39061 Rhbdd1-201ENSMUST00000027322 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Col18a1P39061 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Klhl20-201ENSMUST00000111611 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Gm45062-201ENSMUST00000162564 5842 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Col18a1P39061 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Col18a1P39061 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Col18a1P39061 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Col18a1P39061 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Col18a1P39061 Oprl1-201ENSMUST00000071585 2999 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col18a1P39061 Dhx30-215ENSMUST00000198425 3968 ntTSL 5 BASIC9.97□□□□□ -0.81
Col18a1P39061 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
Col18a1P39061 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Col18a1P39061 Sncaip-202ENSMUST00000115410 3585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col18a1P39061 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC9.97□□□□□ -0.81
Col18a1P39061 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Col18a1P39061 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col18a1P39061 Gm23979-201ENSMUST00000104071 128 ntBASIC9.97□□□□□ -0.81
Col18a1P39061 Gm5752-201ENSMUST00000117771 594 ntBASIC9.97□□□□□ -0.81
Col18a1P39061 Gm7658-201ENSMUST00000119064 1124 ntBASIC9.97□□□□□ -0.81
Col18a1P39061 Gm15618-201ENSMUST00000121610 452 ntBASIC9.97□□□□□ -0.81
Col18a1P39061 Gm5611-201ENSMUST00000164523 852 ntBASIC9.97□□□□□ -0.81
Col18a1P39061 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC9.97□□□□□ -0.81
Col18a1P39061 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC9.97□□□□□ -0.81
Col18a1P39061 Gm27998-201ENSMUST00000184902 361 ntBASIC9.97□□□□□ -0.81
Col18a1P39061 Ighv1-10-201ENSMUST00000194372 355 ntBASIC9.97□□□□□ -0.81
Col18a1P39061 Gm44387-201ENSMUST00000196298 145 ntBASIC9.97□□□□□ -0.81
Col18a1P39061 Gm30517-201ENSMUST00000197350 772 ntBASIC9.97□□□□□ -0.81
Col18a1P39061 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Col18a1P39061 Gm3800-201ENSMUST00000221086 554 ntBASIC9.97□□□□□ -0.81
Col18a1P39061 CT009495.1-201ENSMUST00000224221 862 ntBASIC9.97□□□□□ -0.81
Col18a1P39061 CT009711.2-201ENSMUST00000225352 934 ntBASIC9.97□□□□□ -0.81
Col18a1P39061 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Col18a1P39061 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col18a1P39061 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Col18a1P39061 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC9.97□□□□□ -0.81
Col18a1P39061 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col18a1P39061 Gucy2d-203ENSMUST00000206435 3634 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Col18a1P39061 Cd99l2-201ENSMUST00000037391 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col18a1P39061 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC9.97□□□□□ -0.81
Col18a1P39061 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Col18a1P39061 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC9.97□□□□□ -0.81
Col18a1P39061 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col18a1P39061 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Col18a1P39061 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Col18a1P39061 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
Col18a1P39061 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col18a1P39061 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col18a1P39061 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col18a1P39061 Wiz-203ENSMUST00000087703 4175 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col18a1P39061 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Col18a1P39061 Cd300a-202ENSMUST00000106582 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Col18a1P39061 Ints10-202ENSMUST00000070713 4192 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Col18a1P39061 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Col18a1P39061 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Col18a1P39061 Gm13357-201ENSMUST00000120528 537 ntBASIC9.96□□□□□ -0.81
Col18a1P39061 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC9.96□□□□□ -0.81
Col18a1P39061 Gm22795-201ENSMUST00000157233 118 ntBASIC9.96□□□□□ -0.81
Col18a1P39061 Gm23776-201ENSMUST00000158993 325 ntBASIC9.96□□□□□ -0.81
Col18a1P39061 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Col18a1P39061 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC9.96□□□□□ -0.81
Col18a1P39061 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
Col18a1P39061 Gm2221-201ENSMUST00000209342 418 ntBASIC9.96□□□□□ -0.81
Col18a1P39061 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Col18a1P39061 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC9.96□□□□□ -0.81
Col18a1P39061 AC187103.4-201ENSMUST00000225399 300 ntBASIC9.96□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms