Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm9776-201ENSMUST00000059598 2980 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Nqo1-201ENSMUST00000003947 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm24938-201ENSMUST00000102225 110 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm14336-201ENSMUST00000117491 475 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm14836-201ENSMUST00000118567 471 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm5388-201ENSMUST00000120059 1117 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm14143-201ENSMUST00000121686 357 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm12708-202ENSMUST00000136941 1046 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 D630023F18Rik-202ENSMUST00000148020 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm22226-201ENSMUST00000157355 109 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm22600-201ENSMUST00000157598 269 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm24962-201ENSMUST00000157917 109 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm24393-201ENSMUST00000158135 97 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 A230009B12Rik-201ENSMUST00000159422 898 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm8868-201ENSMUST00000173591 577 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Uchl1os-202ENSMUST00000177319 505 ntTSL 3 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm20918-201ENSMUST00000179629 684 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm9531-202ENSMUST00000183511 775 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm4412-201ENSMUST00000186660 433 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm29142-201ENSMUST00000188009 696 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm28508-201ENSMUST00000188016 696 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm19124-201ENSMUST00000191041 832 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm20936-201ENSMUST00000191049 658 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 BC085271-202ENSMUST00000195236 867 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm30835-201ENSMUST00000198825 689 ntTSL 3 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm5857-201ENSMUST00000198953 493 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm44203-201ENSMUST00000203134 307 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm44253-201ENSMUST00000203387 628 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm44726-201ENSMUST00000203427 217 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm45842-201ENSMUST00000211876 753 ntTSL 3 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm45824-201ENSMUST00000212236 1004 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 9230112J17Rik-202ENSMUST00000217430 764 ntTSL 3 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm18040-201ENSMUST00000217922 827 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Hoxd9P28357 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC8.03□□□□□ -1.12
Hoxd9P28357 AC156790.3-201ENSMUST00000226200 254 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 AC157572.4-201ENSMUST00000228203 549 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Rasgrf1-201ENSMUST00000034909 853 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Olfr543-201ENSMUST00000061482 1130 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Svs3b-201ENSMUST00000063132 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Clec3a-201ENSMUST00000009018 591 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Olfr1331-201ENSMUST00000094831 954 ntAPPRIS P2 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Olfr1286-201ENSMUST00000099617 918 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Atxn7l1-213ENSMUST00000154742 3548 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Pex5l-205ENSMUST00000108225 3109 ntAPPRIS P3 TSL 5 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Eri2-207ENSMUST00000150844 3564 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 4933427D14Rik-202ENSMUST00000108506 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Hoxd9P28357 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Plppr1-201ENSMUST00000076670 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm43322-201ENSMUST00000196232 1612 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm15328-204ENSMUST00000210330 1518 ntTSL 5 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
Hoxd9P28357 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Flrt3-201ENSMUST00000056760 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Sez6-201ENSMUST00000000646 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Cenpi-202ENSMUST00000101251 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 AC171003.1-201ENSMUST00000221667 1665 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Hoxd9P28357 Pkib-201ENSMUST00000066028 1552 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 Napg-201ENSMUST00000025474 3562 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 Igkv11-106-201ENSMUST00000103331 346 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 Ighv1-67-201ENSMUST00000103538 294 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 Anapc15-205ENSMUST00000106978 841 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm14932-201ENSMUST00000117112 453 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm15516-201ENSMUST00000117292 193 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm14745-201ENSMUST00000118480 1096 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm13742-201ENSMUST00000118805 457 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm16200-201ENSMUST00000120385 331 ntBASIC8.02□□□□□ -1.13
Hoxd9P28357 Gm11953-201ENSMUST00000122352 1003 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms