Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
P20040 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
P20040 Gm37534-201ENSMUST00000194483 5222 ntBASIC6.8□□□□□ -1.32
P20040 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
P20040 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
P20040 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
P20040 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
P20040 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
P20040 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
P20040 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
P20040 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
P20040 Gm36952-201ENSMUST00000194923 3625 ntBASIC6.8□□□□□ -1.32
P20040 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
P20040 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
P20040 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
P20040 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC6.79□□□□□ -1.32
P20040 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
P20040 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.79□□□□□ -1.32
P20040 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC6.79□□□□□ -1.32
P20040 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC6.79□□□□□ -1.32
P20040 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
P20040 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
P20040 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
P20040 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC6.79□□□□□ -1.32
P20040 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
P20040 Gm23946-201ENSMUST00000104423 197 ntBASIC6.79□□□□□ -1.32
P20040 Gm26469-201ENSMUST00000116765 121 ntBASIC6.79□□□□□ -1.32
P20040 Gm12460-201ENSMUST00000117147 357 ntBASIC6.79□□□□□ -1.32
P20040 Gm12098-201ENSMUST00000118277 508 ntBASIC6.79□□□□□ -1.32
P20040 Gm5270-201ENSMUST00000121506 1002 ntBASIC6.79□□□□□ -1.32
P20040 Gm12517-201ENSMUST00000122082 425 ntBASIC6.79□□□□□ -1.32
P20040 Gm14328-201ENSMUST00000122178 408 ntBASIC6.79□□□□□ -1.32
P20040 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
P20040 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
P20040 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
P20040 Gm26351-201ENSMUST00000157532 232 ntBASIC6.79□□□□□ -1.32
P20040 Gm25266-201ENSMUST00000158521 304 ntBASIC6.79□□□□□ -1.32
P20040 Gm16103-201ENSMUST00000163003 1279 ntBASIC6.79□□□□□ -1.32
P20040 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC6.79□□□□□ -1.32
P20040 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC6.79□□□□□ -1.32
P20040 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC6.79□□□□□ -1.32
P20040 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
P20040 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC6.79□□□□□ -1.32
P20040 Gm29739-201ENSMUST00000191760 529 ntBASIC6.79□□□□□ -1.32
P20040 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC6.79□□□□□ -1.32
P20040 Gm42977-201ENSMUST00000197497 144 ntBASIC6.79□□□□□ -1.32
P20040 Olfr737-ps1-201ENSMUST00000205382 283 ntBASIC6.79□□□□□ -1.32
P20040 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC6.79□□□□□ -1.32
P20040 Gm18292-201ENSMUST00000216673 919 ntBASIC6.79□□□□□ -1.32
P20040 AC160635.1-201ENSMUST00000216731 474 ntBASIC6.79□□□□□ -1.32
P20040 4930471E19Rik-202ENSMUST00000219150 737 ntTSL 3 BASIC6.79□□□□□ -1.32
P20040 Gm21321-201ENSMUST00000220179 446 ntBASIC6.79□□□□□ -1.32
P20040 AL844586.1-201ENSMUST00000224297 1042 ntBASIC6.79□□□□□ -1.32
P20040 CT009733.1-202ENSMUST00000224941 441 ntBASIC6.79□□□□□ -1.32
P20040 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
P20040 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
P20040 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC6.79□□□□□ -1.32
P20040 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
P20040 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
P20040 Gm44652-201ENSMUST00000208648 2854 ntBASIC6.79□□□□□ -1.32
P20040 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC6.79□□□□□ -1.32
P20040 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
P20040 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
P20040 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC6.79□□□□□ -1.32
P20040 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
P20040 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
P20040 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
P20040 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
P20040 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
P20040 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC6.79□□□□□ -1.32
P20040 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC6.78□□□□□ -1.32
P20040 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 AC105407.2-205ENSMUST00000224680 2733 ntBASIC6.78□□□□□ -1.32
P20040 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC6.78□□□□□ -1.32
P20040 Gm45512-201ENSMUST00000210432 1553 ntBASIC6.78□□□□□ -1.32
P20040 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Gm13301-201ENSMUST00000121728 2446 ntBASIC6.78□□□□□ -1.32
P20040 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC6.78□□□□□ -1.32
P20040 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
P20040 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 AC159193.3-201ENSMUST00000221902 2622 ntBASIC6.78□□□□□ -1.32
P20040 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC6.78□□□□□ -1.32
P20040 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
P20040 Gm15763-201ENSMUST00000120136 403 ntBASIC6.78□□□□□ -1.32
P20040 Gm13726-201ENSMUST00000121278 794 ntBASIC6.78□□□□□ -1.32
P20040 Gm10086-201ENSMUST00000136334 354 ntBASIC6.78□□□□□ -1.32
P20040 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC6.78□□□□□ -1.32
P20040 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Gm26357-201ENSMUST00000158218 115 ntBASIC6.78□□□□□ -1.32
P20040 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms