Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Sdc1P18828 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.13□□□□□ -1.43
Sdc1P18828 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.13□□□□□ -1.43
Sdc1P18828 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.13□□□□□ -1.43
Sdc1P18828 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sdc1P18828 Gm5903-201ENSMUST00000121836 2325 ntBASIC6.13□□□□□ -1.43
Sdc1P18828 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sdc1P18828 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sdc1P18828 Cd59b-203ENSMUST00000111131 555 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Sdc1P18828 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC6.12□□□□□ -1.43
Sdc1P18828 Mir1190-201ENSMUST00000116925 96 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 Gm12460-201ENSMUST00000117147 357 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 Gm15081-201ENSMUST00000119794 844 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 Gm13495-201ENSMUST00000121156 537 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 Gm11895-201ENSMUST00000122165 467 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 Gm10086-201ENSMUST00000136334 354 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Gm6851-201ENSMUST00000154478 395 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 Ear6-202ENSMUST00000169070 893 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sdc1P18828 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Sdc1P18828 Psd3-211ENSMUST00000178529 828 ntTSL 5 BASIC6.12□□□□□ -1.43
Sdc1P18828 Gm26607-201ENSMUST00000180661 867 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 Zfp572-202ENSMUST00000184208 1078 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 Gm29195-201ENSMUST00000189038 379 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 Gm29372-201ENSMUST00000191416 364 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 Trav11n-201ENSMUST00000200113 343 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC6.12□□□□□ -1.43
Sdc1P18828 Gm45090-201ENSMUST00000208775 1148 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC6.12□□□□□ -1.43
Sdc1P18828 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sdc1P18828 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC6.12□□□□□ -1.43
Sdc1P18828 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sdc1P18828 AC112680.1-201ENSMUST00000215435 1349 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC6.12□□□□□ -1.43
Sdc1P18828 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC6.12□□□□□ -1.43
Sdc1P18828 4933404K13Rik-203ENSMUST00000217125 1060 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC6.12□□□□□ -1.43
Sdc1P18828 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 AC139758.2-201ENSMUST00000228380 529 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sdc1P18828 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sdc1P18828 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Olfr1178-201ENSMUST00000075640 972 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sdc1P18828 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sdc1P18828 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sdc1P18828 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Gm42973-201ENSMUST00000197913 3200 ntBASIC6.12□□□□□ -1.43
Sdc1P18828 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sdc1P18828 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sdc1P18828 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.11□□□□□ -1.43
Sdc1P18828 AC129308.1-201ENSMUST00000223800 2309 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sdc1P18828 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sdc1P18828 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Sdc1P18828 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Sdc1P18828 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Sdc1P18828 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sdc1P18828 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Sdc1P18828 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sdc1P18828 Gm2654-201ENSMUST00000221381 1592 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sdc1P18828 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC6.11□□□□□ -1.43
Sdc1P18828 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sdc1P18828 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
Sdc1P18828 Ssr3-202ENSMUST00000119896 1469 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sdc1P18828 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Gm37169-201ENSMUST00000195599 4161 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sdc1P18828 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sdc1P18828 Gm40778-201ENSMUST00000217825 1344 ntBASIC6.11□□□□□ -1.43
Sdc1P18828 1700011H14Rik-201ENSMUST00000022398 1349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sdc1P18828 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sdc1P18828 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Sdc1P18828 Gm15363-201ENSMUST00000118897 631 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms