Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.26□□□□□ -1.41
Cdx1P18111 4930401C15Rik-201ENSMUST00000218300 865 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Gm4178-201ENSMUST00000218307 649 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 AC134254.3-201ENSMUST00000223533 575 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Ndufa4-201ENSMUST00000031637 468 ntTSL 3 BASIC6.26□□□□□ -1.41
Cdx1P18111 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
Cdx1P18111 Olfr543-201ENSMUST00000061482 1130 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Cdx1P18111 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Gm21957-201ENSMUST00000073056 438 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Gm22830-201ENSMUST00000083772 130 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Olfr155-201ENSMUST00000095108 1172 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Cdx1P18111 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Cldn34b1-201ENSMUST00000096852 1079 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Cdx1P18111 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdx1P18111 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Cdx1P18111 2310005A03Rik-201ENSMUST00000142569 1398 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdx1P18111 Stx8-203ENSMUST00000108675 1497 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Cdx1P18111 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Cdx1P18111 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdx1P18111 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Gm43769-201ENSMUST00000201871 4323 ntBASIC6.26□□□□□ -1.41
Cdx1P18111 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx1P18111 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 BC018473-201ENSMUST00000132056 1331 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdx1P18111 CT009604.1-201ENSMUST00000223900 1328 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Gm43187-201ENSMUST00000200652 2397 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Gm6348-201ENSMUST00000200751 1443 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Gm6468-201ENSMUST00000201076 1443 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Gm6346-201ENSMUST00000201146 1443 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Malat1-201ENSMUST00000172812 6983 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cdx1P18111 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cdx1P18111 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Cdx1P18111 Gm25594-201ENSMUST00000102274 82 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC6.25□□□□□ -1.41
Cdx1P18111 Cd59b-203ENSMUST00000111131 555 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Gm14481-201ENSMUST00000117178 629 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Gm14336-201ENSMUST00000117491 475 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Gm9050-201ENSMUST00000119501 448 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Olfr621-ps1-201ENSMUST00000119741 938 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cdx1P18111 Gm14855-201ENSMUST00000119925 192 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Gm11765-201ENSMUST00000121173 1205 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Gm11454-201ENSMUST00000144092 714 ntTSL 3 BASIC6.25□□□□□ -1.41
Cdx1P18111 Gm17138-201ENSMUST00000165702 459 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Gm3275-201ENSMUST00000169145 487 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Sdhd-201ENSMUST00000000175 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 2610020F03Rik-201ENSMUST00000180401 588 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Gm26726-201ENSMUST00000181889 395 ntTSL 3 BASIC6.25□□□□□ -1.41
Cdx1P18111 1700019P21Rik-201ENSMUST00000186955 411 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Gm8010-201ENSMUST00000194128 873 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Gm8143-201ENSMUST00000203654 1186 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Gm32916-201ENSMUST00000207884 935 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdx1P18111 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdx1P18111 1700012B07Rik-201ENSMUST00000020941 919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Anapc15-ps-202ENSMUST00000218771 399 ntAPPRIS P5 BASIC6.25□□□□□ -1.41
Cdx1P18111 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdx1P18111 CT009546.3-201ENSMUST00000220914 208 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Gm2915-201ENSMUST00000222565 787 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Borcs8-201ENSMUST00000002418 810 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Fxyd2-201ENSMUST00000041005 632 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Cenpx-202ENSMUST00000055424 606 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Gm10490-201ENSMUST00000086274 360 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cdx1P18111 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Cdx1P18111 Gm21541-201ENSMUST00000098128 870 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Olfr1239-201ENSMUST00000099780 918 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cdx1P18111 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cdx1P18111 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cdx1P18111 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Gm43420-201ENSMUST00000198012 1857 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.25□□□□□ -1.41
Cdx1P18111 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Olfr381-203ENSMUST00000214623 2656 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cdx1P18111 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cdx1P18111 Golga1-201ENSMUST00000039165 4869 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cdx1P18111 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdx1P18111 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Cdx1P18111 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx1P18111 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms