Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Umodl1-201ENSMUST00000066554 5007 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Tshz2-201ENSMUST00000109157 5083 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Zfp541-201ENSMUST00000108509 4561 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Gabrb3-206ENSMUST00000196198 4348 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Sez6-201ENSMUST00000000646 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Aoc3-202ENSMUST00000103105 4397 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Irf4-202ENSMUST00000110307 4761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Irf4-201ENSMUST00000021784 4764 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Gm44769-201ENSMUST00000206120 2809 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Nup210l-202ENSMUST00000200410 5710 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Sf3b3-201ENSMUST00000042012 4525 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Gm14772-201ENSMUST00000116562 514 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Gm14925-201ENSMUST00000120611 438 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Gm12804-201ENSMUST00000121030 999 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Mir5617-201ENSMUST00000176786 57 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Mir6971-201ENSMUST00000183497 63 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Gm28117-201ENSMUST00000188472 371 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Gm28801-201ENSMUST00000188761 449 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 AC157085.1-201ENSMUST00000216343 162 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 AC132587.1-201ENSMUST00000220562 166 ntBASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Col4a6B1AVK5 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Nbr1-202ENSMUST00000103098 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Gm37520-201ENSMUST00000194883 2672 ntBASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Gm45737-201ENSMUST00000208344 1612 ntBASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Olfr1124-202ENSMUST00000215909 2422 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Gm16221-201ENSMUST00000117331 393 ntBASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Gm15596-201ENSMUST00000121139 784 ntBASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Gm12920-201ENSMUST00000121818 1186 ntBASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Gm7289-201ENSMUST00000168993 734 ntBASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Gm21614-201ENSMUST00000183260 1005 ntBASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Aox2-201ENSMUST00000114366 5771 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Gm5903-201ENSMUST00000121836 2325 ntBASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Pcsk2-201ENSMUST00000028905 4723 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Gm4073-201ENSMUST00000176792 3500 ntBASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Tnr-201ENSMUST00000111669 4424 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Col4a6B1AVK5 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Col4a6B1AVK5 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col4a6B1AVK5 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col4a6B1AVK5 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col4a6B1AVK5 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col4a6B1AVK5 Gm14864-201ENSMUST00000116164 1087 ntBASIC7.77□□□□□ -1.17
Col4a6B1AVK5 Gm12653-201ENSMUST00000117778 561 ntBASIC7.77□□□□□ -1.17
Col4a6B1AVK5 Gm22882-201ENSMUST00000157749 124 ntBASIC7.77□□□□□ -1.17
Col4a6B1AVK5 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Col4a6B1AVK5 Gm16298-201ENSMUST00000161107 420 ntBASIC7.77□□□□□ -1.17
Col4a6B1AVK5 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC7.77□□□□□ -1.17
Col4a6B1AVK5 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Col4a6B1AVK5 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC7.77□□□□□ -1.17
Col4a6B1AVK5 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC7.77□□□□□ -1.17
Col4a6B1AVK5 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms