Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Gm23484-201ENSMUST00000104178 131 ntBASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Gm15209-201ENSMUST00000117703 400 ntBASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Gm14746-201ENSMUST00000120309 741 ntBASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Gm13726-201ENSMUST00000121278 794 ntBASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Gm10157-201ENSMUST00000139408 343 ntBASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Gm16103-201ENSMUST00000163003 1279 ntBASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Gm26505-201ENSMUST00000176208 166 ntBASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Gm18131-201ENSMUST00000199241 449 ntBASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 AC123920.1-201ENSMUST00000221449 384 ntBASIC9.06□□□□□ -0.96
Nup88Q8CEC0 AC157650.2-201ENSMUST00000224666 328 ntBASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Gm25259-201ENSMUST00000083048 193 ntBASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nup88Q8CEC0 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm28497-201ENSMUST00000189646 3029 ntBASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Olfr1115-203ENSMUST00000214119 2455 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm22426-201ENSMUST00000103811 96 ntBASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm22660-201ENSMUST00000104193 130 ntBASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm6746-201ENSMUST00000108774 483 ntBASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm7910-201ENSMUST00000117896 835 ntBASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm12098-201ENSMUST00000118277 508 ntBASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm11558-201ENSMUST00000118454 459 ntBASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm16044-201ENSMUST00000118475 450 ntBASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm25780-201ENSMUST00000122528 253 ntBASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Mir5100-201ENSMUST00000174993 64 ntBASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm8529-201ENSMUST00000183298 745 ntBASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm5314-201ENSMUST00000204852 466 ntBASIC9.05□□□□□ -0.96
Nup88Q8CEC0 AC155259.1-201ENSMUST00000214794 477 ntBASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm7392-201ENSMUST00000217815 345 ntBASIC9.05□□□□□ -0.96
Nup88Q8CEC0 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm20302-201ENSMUST00000080671 275 ntBASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm37457-201ENSMUST00000193639 2433 ntBASIC9.05□□□□□ -0.96
Nup88Q8CEC0 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm21043-201ENSMUST00000199316 1517 ntBASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Gm6284-201ENSMUST00000209609 4287 ntBASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Nup88Q8CEC0 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Gm44117-201ENSMUST00000204442 1758 ntBASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Gm7200-201ENSMUST00000188426 1163 ntBASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Gm38078-201ENSMUST00000192771 392 ntBASIC9.04□□□□□ -0.96
Nup88Q8CEC0 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms