Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Gm10744-201ENSMUST00000220184 2706 ntBASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Prps1l1-201ENSMUST00000134550 1676 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm23484-201ENSMUST00000104178 131 ntBASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm11443-201ENSMUST00000118790 479 ntBASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm6798-201ENSMUST00000119961 360 ntBASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm9378-201ENSMUST00000120315 471 ntBASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm5931-201ENSMUST00000121308 477 ntBASIC9.04□□□□□ -0.96
Vps53Q8CCB4 B430319H21Rik-201ENSMUST00000123420 734 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm22670-201ENSMUST00000158724 143 ntBASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm29240-201ENSMUST00000187248 286 ntBASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm37339-201ENSMUST00000194142 392 ntBASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm37585-201ENSMUST00000195440 280 ntBASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Zfp474-202ENSMUST00000209270 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC9.04□□□□□ -0.96
Vps53Q8CCB4 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 AC158686.1-201ENSMUST00000218068 2332 ntBASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Gm42576-201ENSMUST00000202336 2846 ntBASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Gm37326-201ENSMUST00000192828 3071 ntBASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Gm12394-201ENSMUST00000107981 3348 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Gm25083-201ENSMUST00000102319 92 ntBASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Gm11969-201ENSMUST00000118848 356 ntBASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Gm12773-201ENSMUST00000120134 587 ntBASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Gm17129-201ENSMUST00000168168 505 ntBASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Gm24083-201ENSMUST00000175174 120 ntBASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Gm5300-201ENSMUST00000182201 1003 ntBASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Gm38078-201ENSMUST00000192771 392 ntBASIC9.03□□□□□ -0.96
Vps53Q8CCB4 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Gm19172-201ENSMUST00000203170 1246 ntBASIC9.03□□□□□ -0.96
Vps53Q8CCB4 AC121788.2-201ENSMUST00000218284 1255 ntTSL 5 BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Gm9118-201ENSMUST00000219246 754 ntBASIC9.03□□□□□ -0.96
Vps53Q8CCB4 AC122937.2-201ENSMUST00000228258 1051 ntBASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Vps53Q8CCB4 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms