Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ccdc60Q8C4J0 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ccdc60Q8C4J0 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Ccdc60Q8C4J0 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ccdc60Q8C4J0 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ccdc60Q8C4J0 Rad54l-201ENSMUST00000102704 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ccdc60Q8C4J0 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ccdc60Q8C4J0 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Gm12632-201ENSMUST00000121223 495 ntBASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Gm4835-201ENSMUST00000155839 972 ntBASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Gm7763-201ENSMUST00000182220 1006 ntBASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Gm38254-201ENSMUST00000192276 1009 ntBASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Gm38305-201ENSMUST00000194825 223 ntBASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 AC154806.1-202ENSMUST00000227949 885 ntBASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 AC158605.4-201ENSMUST00000219013 3361 ntBASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 AC166341.5-201ENSMUST00000222206 1400 ntBASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Gm3203-201ENSMUST00000197670 2389 ntBASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Gm7562-201ENSMUST00000210502 2537 ntBASIC9.71□□□□□ -0.86
Ccdc60Q8C4J0 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Gm39244-201ENSMUST00000209663 1940 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Gm29113-201ENSMUST00000185991 3432 ntBASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Gm12344-201ENSMUST00000117087 329 ntBASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Gm13622-201ENSMUST00000120658 433 ntBASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Gm7436-201ENSMUST00000187229 391 ntBASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Gm5586-201ENSMUST00000206264 795 ntBASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Gm45399-201ENSMUST00000209955 1016 ntBASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Olfr209-204ENSMUST00000213779 564 ntTSL 5 BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 AC069562.1-201ENSMUST00000224206 434 ntBASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 AC118249.1-201ENSMUST00000224822 608 ntBASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Gm42546-201ENSMUST00000201584 2592 ntBASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Gm6767-201ENSMUST00000118650 1381 ntBASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Gm37706-201ENSMUST00000195379 2765 ntBASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 CT009515.4-201ENSMUST00000228165 1494 ntBASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Gm42973-201ENSMUST00000197913 3200 ntBASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Olfr429-202ENSMUST00000216346 2510 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Ccdc60Q8C4J0 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Gm10744-201ENSMUST00000220184 2706 ntBASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Gm22660-201ENSMUST00000104193 130 ntBASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Gm15763-201ENSMUST00000120136 403 ntBASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Gm11895-201ENSMUST00000122165 467 ntBASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Gm25164-201ENSMUST00000158908 116 ntBASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Gm9286-201ENSMUST00000173586 508 ntBASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Gm20813-201ENSMUST00000186646 705 ntBASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Gm21923-201ENSMUST00000188455 696 ntBASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Gm42595-201ENSMUST00000196771 1607 ntBASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Gm42584-201ENSMUST00000201404 220 ntBASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Gm18765-201ENSMUST00000203166 660 ntBASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Gm44116-201ENSMUST00000204269 1525 ntBASIC9.69□□□□□ -0.86
Ccdc60Q8C4J0 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms