Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm37499-201ENSMUST00000194683 3478 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb1P63158 CT009480.1-201ENSMUST00000225771 4480 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 Gm3883-201ENSMUST00000098119 3229 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Hmgb1P63158 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC8.76□□□□□ -1.01
Hmgb1P63158 Gm26344-201ENSMUST00000104553 132 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC8.76□□□□□ -1.01
Hmgb1P63158 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Hmgb1P63158 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Hmgb1P63158 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Hmgb1P63158 Pinlyp-201ENSMUST00000011776 843 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb1P63158 Gm5390-201ENSMUST00000119069 1230 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 Gm8832-201ENSMUST00000119890 395 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 Gm6620-201ENSMUST00000120113 715 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb1P63158 Gm11765-201ENSMUST00000121173 1205 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC8.76□□□□□ -1.01
Hmgb1P63158 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC8.76□□□□□ -1.01
Hmgb1P63158 Gm22202-201ENSMUST00000158608 311 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 4930519F09Rik-202ENSMUST00000163084 1111 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 Nup37-202ENSMUST00000169309 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb1P63158 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Hmgb1P63158 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 Mir3473a-201ENSMUST00000175011 78 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 4930553I04Rik-201ENSMUST00000196722 670 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 Gm7482-201ENSMUST00000206446 505 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 Gm45889-201ENSMUST00000209535 1057 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC8.76□□□□□ -1.01
Hmgb1P63158 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC8.76□□□□□ -1.01
Hmgb1P63158 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC8.76□□□□□ -1.01
Hmgb1P63158 AC142407.1-201ENSMUST00000214371 494 ntTSL 5 BASIC8.76□□□□□ -1.01
Hmgb1P63158 AC134607.1-201ENSMUST00000214707 485 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 AC125543.2-201ENSMUST00000222114 105 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 CT030170.7-201ENSMUST00000223372 103 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 AC132468.1-201ENSMUST00000224706 499 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 AC154747.2-201ENSMUST00000225109 780 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 AC154595.1-201ENSMUST00000225533 1059 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 AC160930.2-201ENSMUST00000226608 303 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb1P63158 Gm6083-201ENSMUST00000075518 357 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Hmgb1P63158 Gm26132-201ENSMUST00000083166 148 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 Snora57-201ENSMUST00000093658 148 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb1P63158 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb1P63158 Gm37109-201ENSMUST00000195475 2254 ntBASIC8.76□□□□□ -1.01
Hmgb1P63158 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Hmgb1P63158 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
Hmgb1P63158 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Hmgb1P63158 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb1P63158 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb1P63158 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb1P63158 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Hmgb1P63158 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC8.76□□□□□ -1.01
Hmgb1P63158 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC8.76□□□□□ -1.01
Hmgb1P63158 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb1P63158 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC8.75□□□□□ -1.01
Hmgb1P63158 Gm38339-201ENSMUST00000195479 1829 ntBASIC8.75□□□□□ -1.01
Hmgb1P63158 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Hmgb1P63158 Gm25501-201ENSMUST00000104429 132 ntBASIC8.75□□□□□ -1.01
Hmgb1P63158 Gm11621-201ENSMUST00000118253 589 ntBASIC8.75□□□□□ -1.01
Hmgb1P63158 Gm12098-201ENSMUST00000118277 508 ntBASIC8.75□□□□□ -1.01
Hmgb1P63158 Gm13726-201ENSMUST00000121278 794 ntBASIC8.75□□□□□ -1.01
Hmgb1P63158 Gm4908-201ENSMUST00000121923 1005 ntBASIC8.75□□□□□ -1.01
Hmgb1P63158 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC8.75□□□□□ -1.01
Hmgb1P63158 Gm9359-201ENSMUST00000163721 1221 ntBASIC8.75□□□□□ -1.01
Hmgb1P63158 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC8.75□□□□□ -1.01
Hmgb1P63158 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 Gm36996-201ENSMUST00000194466 250 ntBASIC8.75□□□□□ -1.01
Hmgb1P63158 Gm42794-201ENSMUST00000197636 835 ntTSL 3 BASIC8.75□□□□□ -1.01
Hmgb1P63158 Gm43690-201ENSMUST00000201213 266 ntBASIC8.75□□□□□ -1.01
Hmgb1P63158 Gm5609-201ENSMUST00000210008 1267 ntBASIC8.75□□□□□ -1.01
Hmgb1P63158 Olfr472-202ENSMUST00000210420 1083 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Hmgb1P63158 Olfr209-204ENSMUST00000213779 564 ntTSL 5 BASIC8.75□□□□□ -1.01
Hmgb1P63158 CT009733.1-202ENSMUST00000224941 441 ntBASIC8.75□□□□□ -1.01
Hmgb1P63158 Gnpnat1-202ENSMUST00000226276 710 ntBASIC8.75□□□□□ -1.01
Hmgb1P63158 Bdh2-201ENSMUST00000029817 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 Ensa-201ENSMUST00000037983 3845 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 2410137M14Rik-201ENSMUST00000039846 865 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 Hist1h1t-201ENSMUST00000041052 912 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Hmgb1P63158 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Hmgb1P63158 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Hmgb1P63158 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Hmgb1P63158 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmgb1P63158 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms