Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm25276-201ENSMUST00000104300 124 ntBASIC9.75□□□□□ -0.85
Msh6P54276 Gm12955-201ENSMUST00000119689 957 ntBASIC9.75□□□□□ -0.85
Msh6P54276 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC9.75□□□□□ -0.85
Msh6P54276 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Msh6P54276 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Msh6P54276 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC9.75□□□□□ -0.85
Msh6P54276 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC9.75□□□□□ -0.85
Msh6P54276 Gm26179-201ENSMUST00000177723 132 ntBASIC9.75□□□□□ -0.85
Msh6P54276 Gm18797-201ENSMUST00000190809 1174 ntBASIC9.75□□□□□ -0.85
Msh6P54276 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC9.75□□□□□ -0.85
Msh6P54276 Gm2505-201ENSMUST00000200413 825 ntBASIC9.75□□□□□ -0.85
Msh6P54276 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC9.75□□□□□ -0.85
Msh6P54276 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Msh6P54276 Gm45634-201ENSMUST00000209736 1990 ntBASIC9.75□□□□□ -0.85
Msh6P54276 Ephx2-202ENSMUST00000224698 1985 ntBASIC9.75□□□□□ -0.85
Msh6P54276 AC165260.6-202ENSMUST00000224959 1958 ntBASIC9.75□□□□□ -0.85
Msh6P54276 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
Msh6P54276 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Msh6P54276 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 Gm37956-201ENSMUST00000195208 2010 ntBASIC9.74□□□□□ -0.85
Msh6P54276 Gm44228-201ENSMUST00000204888 2026 ntBASIC9.74□□□□□ -0.85
Msh6P54276 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 Retreg1-203ENSMUST00000226438 2783 ntBASIC9.74□□□□□ -0.85
Msh6P54276 Dpp6-203ENSMUST00000120555 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC9.74□□□□□ -0.85
Msh6P54276 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC9.74□□□□□ -0.85
Msh6P54276 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 Cldn18-201ENSMUST00000035048 4172 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Msh6P54276 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Msh6P54276 Flnb-201ENSMUST00000052678 9100 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Msh6P54276 Ctnnd1-221ENSMUST00000111695 6344 ntTSL 5 BASIC9.74□□□□□ -0.85
Msh6P54276 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC9.74□□□□□ -0.85
Msh6P54276 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC9.74□□□□□ -0.85
Msh6P54276 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC9.74□□□□□ -0.85
Msh6P54276 Gm7244-201ENSMUST00000164658 455 ntBASIC9.74□□□□□ -0.85
Msh6P54276 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC9.74□□□□□ -0.85
Msh6P54276 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC9.74□□□□□ -0.85
Msh6P54276 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC9.74□□□□□ -0.85
Msh6P54276 Mir8094-201ENSMUST00000183361 117 ntBASIC9.74□□□□□ -0.85
Msh6P54276 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC9.74□□□□□ -0.85
Msh6P54276 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC9.74□□□□□ -0.85
Msh6P54276 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 Igkv4-77-201ENSMUST00000199410 352 ntBASIC9.74□□□□□ -0.85
Msh6P54276 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Msh6P54276 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC9.74□□□□□ -0.85
Msh6P54276 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC9.74□□□□□ -0.85
Msh6P54276 AC138284.3-201ENSMUST00000217345 4663 ntBASIC9.74□□□□□ -0.85
Msh6P54276 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Msh6P54276 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC9.74□□□□□ -0.85
Msh6P54276 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Msh6P54276 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC9.73□□□□□ -0.85
Msh6P54276 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC9.73□□□□□ -0.85
Msh6P54276 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Prdm16-204ENSMUST00000105636 8426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Pcdh15-225ENSMUST00000149977 5843 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Msh6P54276 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Msh6P54276 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Msh6P54276 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Mroh2a-201ENSMUST00000061013 7526 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Msh6P54276 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Msh6P54276 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Gm14279-201ENSMUST00000117142 332 ntBASIC9.73□□□□□ -0.85
Msh6P54276 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC9.73□□□□□ -0.85
Msh6P54276 Gm10243-201ENSMUST00000117571 333 ntBASIC9.73□□□□□ -0.85
Msh6P54276 Gm13156-201ENSMUST00000118348 321 ntBASIC9.73□□□□□ -0.85
Msh6P54276 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC9.73□□□□□ -0.85
Msh6P54276 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC9.73□□□□□ -0.85
Msh6P54276 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Msh6P54276 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC9.73□□□□□ -0.85
Msh6P54276 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC9.73□□□□□ -0.85
Msh6P54276 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms