Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Ttc21b-201ENSMUST00000102718 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Gm11198-201ENSMUST00000119771 974 ntBASIC7.81□□□□□ -1.16
HttP42859 Gm13282-201ENSMUST00000121577 545 ntBASIC7.81□□□□□ -1.16
HttP42859 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC7.81□□□□□ -1.16
HttP42859 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC7.81□□□□□ -1.16
HttP42859 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC7.81□□□□□ -1.16
HttP42859 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Nfam1-203ENSMUST00000109503 2834 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC7.81□□□□□ -1.16
HttP42859 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
HttP42859 Prkaa2-201ENSMUST00000030243 7969 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Wfdc5-201ENSMUST00000045127 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Gm24065-201ENSMUST00000157487 264 ntBASIC7.81□□□□□ -1.16
HttP42859 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC7.81□□□□□ -1.16
HttP42859 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HttP42859 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
HttP42859 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC7.8□□□□□ -1.16
HttP42859 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Txndc16-201ENSMUST00000022377 4028 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
HttP42859 9930014A18Rik-202ENSMUST00000181910 4116 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Pes1-202ENSMUST00000109985 2923 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
HttP42859 Pes1-201ENSMUST00000020705 2911 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Il5ra-201ENSMUST00000167925 1704 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
HttP42859 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Gm13835-201ENSMUST00000118459 685 ntBASIC7.8□□□□□ -1.16
HttP42859 Gm12955-201ENSMUST00000119689 957 ntBASIC7.8□□□□□ -1.16
HttP42859 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC7.8□□□□□ -1.16
HttP42859 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC7.8□□□□□ -1.16
HttP42859 Cfhr3-201ENSMUST00000170441 1022 ntBASIC7.8□□□□□ -1.16
HttP42859 Gm22655-201ENSMUST00000174949 96 ntBASIC7.8□□□□□ -1.16
HttP42859 Gm23187-201ENSMUST00000175746 86 ntBASIC7.8□□□□□ -1.16
HttP42859 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
HttP42859 Gm43233-201ENSMUST00000200491 616 ntBASIC7.8□□□□□ -1.16
HttP42859 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC7.8□□□□□ -1.16
HttP42859 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC7.8□□□□□ -1.16
HttP42859 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC7.8□□□□□ -1.16
HttP42859 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC7.8□□□□□ -1.16
HttP42859 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
HttP42859 Cyp4v3-201ENSMUST00000095328 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
HttP42859 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 AC159379.2-201ENSMUST00000220244 2482 ntBASIC7.8□□□□□ -1.16
HttP42859 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Wdr48-208ENSMUST00000217472 2997 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.8□□□□□ -1.16
HttP42859 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC7.8□□□□□ -1.16
HttP42859 Gm6056-201ENSMUST00000221253 488 ntBASIC7.8□□□□□ -1.16
HttP42859 AC154718.1-201ENSMUST00000226676 250 ntBASIC7.8□□□□□ -1.16
HttP42859 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Gm37499-201ENSMUST00000194683 3478 ntBASIC7.8□□□□□ -1.16
HttP42859 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HttP42859 Sepsecs-201ENSMUST00000031069 5252 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Gm6368-201ENSMUST00000119727 2147 ntBASIC7.79□□□□□ -1.16
HttP42859 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Lrit1-201ENSMUST00000120052 4325 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HttP42859 Gm15300-201ENSMUST00000122324 279 ntBASIC7.79□□□□□ -1.16
HttP42859 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC7.79□□□□□ -1.16
HttP42859 Igkv12-67-201ENSMUST00000197806 354 ntBASIC7.79□□□□□ -1.16
HttP42859 AC161252.1-201ENSMUST00000225536 467 ntBASIC7.79□□□□□ -1.16
HttP42859 CT009515.3-201ENSMUST00000226509 671 ntBASIC7.79□□□□□ -1.16
HttP42859 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 132.6 ms