Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm12101-201ENSMUST00000121590 390 ntBASIC10□□□□□ -0.81
Col18a1P39061 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC10□□□□□ -0.81
Col18a1P39061 Gm6428-201ENSMUST00000161062 345 ntBASIC10□□□□□ -0.81
Col18a1P39061 Gm6004-201ENSMUST00000173237 1116 ntBASIC10□□□□□ -0.81
Col18a1P39061 Gm26784-201ENSMUST00000181666 410 ntBASIC10□□□□□ -0.81
Col18a1P39061 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC10□□□□□ -0.81
Col18a1P39061 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC10□□□□□ -0.81
Col18a1P39061 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
Col18a1P39061 Gm37002-201ENSMUST00000194560 373 ntBASIC10□□□□□ -0.81
Col18a1P39061 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC10□□□□□ -0.81
Col18a1P39061 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC10□□□□□ -0.81
Col18a1P39061 Gm19340-201ENSMUST00000221995 345 ntBASIC10□□□□□ -0.81
Col18a1P39061 AC154380.1-201ENSMUST00000226804 720 ntBASIC10□□□□□ -0.81
Col18a1P39061 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 Cdh8-204ENSMUST00000142129 2711 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 Pitpnm2os1-201ENSMUST00000161697 1618 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 Clstn3-201ENSMUST00000008297 4014 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC10□□□□□ -0.81
Col18a1P39061 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 Olfr1124-202ENSMUST00000215909 2422 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Col18a1P39061 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC10□□□□□ -0.81
Col18a1P39061 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC10□□□□□ -0.81
Col18a1P39061 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Col18a1P39061 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Col18a1P39061 Gm38236-201ENSMUST00000192661 3229 ntBASIC10□□□□□ -0.81
Col18a1P39061 AC115760.1-201ENSMUST00000225160 1327 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Col18a1P39061 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Col18a1P39061 Gm37069-201ENSMUST00000192742 4142 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 AC154171.3-201ENSMUST00000224519 2505 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Col18a1P39061 Bcas3-205ENSMUST00000108061 3810 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Col18a1P39061 Gm15310-201ENSMUST00000117891 372 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 Gm7189-201ENSMUST00000119811 429 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 Gm4773-201ENSMUST00000120392 702 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 Gm14741-201ENSMUST00000120777 1009 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 Gm18006-201ENSMUST00000177411 662 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 Gm7266-201ENSMUST00000187999 405 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 Gm18797-201ENSMUST00000190809 1174 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 Gm34768-201ENSMUST00000193884 565 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Col18a1P39061 Ass-ps1-201ENSMUST00000197717 761 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 Gm44411-201ENSMUST00000204172 349 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 Gm44163-201ENSMUST00000205140 475 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 Gm5928-201ENSMUST00000221839 466 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 Mir106b-201ENSMUST00000083580 82 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Col18a1P39061 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
Col18a1P39061 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.99□□□□□ -0.81
Col18a1P39061 Npy5r-201ENSMUST00000070810 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 9130214F15Rik-201ENSMUST00000208727 1653 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 Cblb-205ENSMUST00000227756 3378 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 Gm43609-201ENSMUST00000199084 2712 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 Gm37200-201ENSMUST00000193689 2172 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 Olfr601-202ENSMUST00000210431 2266 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
Col18a1P39061 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 AC122769.1-201ENSMUST00000226930 1714 ntBASIC9.99□□□□□ -0.81
Col18a1P39061 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 Esrrg-203ENSMUST00000110939 4833 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Col18a1P39061 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Col18a1P39061 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC9.98□□□□□ -0.81
Col18a1P39061 Gm11902-201ENSMUST00000118849 270 ntBASIC9.98□□□□□ -0.81
Col18a1P39061 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Gm24050-201ENSMUST00000158623 290 ntBASIC9.98□□□□□ -0.81
Col18a1P39061 Mir1929-201ENSMUST00000158635 93 ntBASIC9.98□□□□□ -0.81
Col18a1P39061 Gm16557-201ENSMUST00000159182 191 ntBASIC9.98□□□□□ -0.81
Col18a1P39061 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC9.98□□□□□ -0.81
Col18a1P39061 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC9.98□□□□□ -0.81
Col18a1P39061 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC9.98□□□□□ -0.81
Col18a1P39061 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Col18a1P39061 AC114573.1-201ENSMUST00000224120 1210 ntBASIC9.98□□□□□ -0.81
Col18a1P39061 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Col18a1P39061 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col18a1P39061 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC9.98□□□□□ -0.81
Col18a1P39061 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms