Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Slc39a9-201ENSMUST00000085245 5201 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Olfr1221-204ENSMUST00000217635 3753 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Hoxd9P28357 AC154368.2-201ENSMUST00000222334 1724 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Mstn-202ENSMUST00000191197 2461 ntTSL 5 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Mill1-201ENSMUST00000066780 2489 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Epn2-202ENSMUST00000108711 4287 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Npnt-201ENSMUST00000042729 3601 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Sat2-202ENSMUST00000108656 968 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm14630-201ENSMUST00000118057 246 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm12170-201ENSMUST00000119281 300 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm11260-201ENSMUST00000121163 942 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm14425-201ENSMUST00000121240 606 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm15694-201ENSMUST00000121984 283 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm6285-201ENSMUST00000122012 498 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm25842-201ENSMUST00000122590 322 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 9530026F06Rik-201ENSMUST00000141000 892 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm23207-201ENSMUST00000158665 102 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm28637-201ENSMUST00000179424 345 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm23186-201ENSMUST00000180078 107 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm26726-201ENSMUST00000181889 395 ntTSL 3 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm29413-201ENSMUST00000186019 880 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm28597-201ENSMUST00000187664 666 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm29639-201ENSMUST00000188375 580 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm28337-201ENSMUST00000190425 666 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm5256-201ENSMUST00000191412 877 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Igkv12-42-201ENSMUST00000198769 327 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm18980-201ENSMUST00000199098 1079 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm42605-201ENSMUST00000199565 385 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Ociad1-204ENSMUST00000200935 1139 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm42646-201ENSMUST00000202233 914 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm44267-201ENSMUST00000204132 385 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm44118-201ENSMUST00000204665 229 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm44862-201ENSMUST00000207981 1055 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm45346-201ENSMUST00000209925 1273 ntTSL 5 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm45436-201ENSMUST00000210729 469 ntTSL 5 BASIC8.04□□□□□ -1.12
Hoxd9P28357 4933407I05Rik-201ENSMUST00000213311 482 ntTSL 5 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm19073-201ENSMUST00000219978 555 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 AC125190.2-201ENSMUST00000221160 497 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 AC211878.7-201ENSMUST00000222851 661 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 AC116395.1-201ENSMUST00000225480 1143 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 AC099629.1-201ENSMUST00000226778 464 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 AC139758.2-201ENSMUST00000228380 529 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm9788-201ENSMUST00000057038 906 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Tas2r138-201ENSMUST00000076565 996 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Olfr659-201ENSMUST00000098170 969 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Ufm1-203ENSMUST00000146598 4890 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm44423-201ENSMUST00000203746 3158 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Ppwd1-201ENSMUST00000022226 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm43686-201ENSMUST00000197351 2439 ntBASIC8.04□□□□□ -1.12
Hoxd9P28357 Sncaip-202ENSMUST00000115410 3585 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Ccser2-209ENSMUST00000183038 1681 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Trim39-201ENSMUST00000042717 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Olfr155-202ENSMUST00000107860 3480 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Map4k4-213ENSMUST00000193682 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Unc5c-201ENSMUST00000075282 3890 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Fshb-201ENSMUST00000028533 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Cyp2c37-201ENSMUST00000049178 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Hoxd9P28357 AC102431.2-201ENSMUST00000224071 2448 ntBASIC8.03□□□□□ -1.12
Hoxd9P28357 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Gm17259-201ENSMUST00000181520 4608 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Synj2-209ENSMUST00000115790 4808 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Hoxd9P28357 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hoxd9P28357 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms