Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
P20040 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
P20040 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
P20040 Zwilch-211ENSMUST00000176794 1746 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
P20040 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC6.81□□□□□ -1.32
P20040 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
P20040 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC6.81□□□□□ -1.32
P20040 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
P20040 Gm43769-201ENSMUST00000201871 4323 ntBASIC6.81□□□□□ -1.32
P20040 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.81□□□□□ -1.32
P20040 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
P20040 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
P20040 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
P20040 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.81□□□□□ -1.32
P20040 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
P20040 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
P20040 Rps19-ps2-201ENSMUST00000100614 438 ntBASIC6.81□□□□□ -1.32
P20040 Gm6798-201ENSMUST00000119961 360 ntBASIC6.81□□□□□ -1.32
P20040 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
P20040 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
P20040 Gm24347-201ENSMUST00000158711 142 ntBASIC6.81□□□□□ -1.32
P20040 Rps19-ps1-201ENSMUST00000168472 438 ntBASIC6.81□□□□□ -1.32
P20040 Gm4246-201ENSMUST00000172822 216 ntBASIC6.81□□□□□ -1.32
P20040 Gm8974-201ENSMUST00000175770 479 ntBASIC6.81□□□□□ -1.32
P20040 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
P20040 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
P20040 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC6.81□□□□□ -1.32
P20040 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC6.81□□□□□ -1.32
P20040 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC6.81□□□□□ -1.32
P20040 Gm28983-201ENSMUST00000186685 614 ntBASIC6.81□□□□□ -1.32
P20040 Gm28150-201ENSMUST00000187305 614 ntBASIC6.81□□□□□ -1.32
P20040 Gm28377-201ENSMUST00000189695 720 ntBASIC6.81□□□□□ -1.32
P20040 Gm17530-201ENSMUST00000194336 472 ntBASIC6.81□□□□□ -1.32
P20040 Gm43013-201ENSMUST00000198216 247 ntBASIC6.81□□□□□ -1.32
P20040 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC6.81□□□□□ -1.32
P20040 Gm42472-201ENSMUST00000201626 859 ntBASIC6.81□□□□□ -1.32
P20040 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
P20040 Gm45756-201ENSMUST00000212491 407 ntBASIC6.81□□□□□ -1.32
P20040 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC6.81□□□□□ -1.32
P20040 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC6.81□□□□□ -1.32
P20040 Gm4120-201ENSMUST00000220456 578 ntBASIC6.81□□□□□ -1.32
P20040 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
P20040 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
P20040 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
P20040 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC6.81□□□□□ -1.32
P20040 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
P20040 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
P20040 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
P20040 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
P20040 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
P20040 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
P20040 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
P20040 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
P20040 Gm3742-201ENSMUST00000220907 1391 ntBASIC6.81□□□□□ -1.32
P20040 Gm42837-201ENSMUST00000197071 2829 ntBASIC6.81□□□□□ -1.32
P20040 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
P20040 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
P20040 Gm8204-201ENSMUST00000185696 2144 ntBASIC6.8□□□□□ -1.32
P20040 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
P20040 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
P20040 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
P20040 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
P20040 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
P20040 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC6.8□□□□□ -1.32
P20040 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
P20040 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
P20040 Gm14036-201ENSMUST00000118248 480 ntBASIC6.8□□□□□ -1.32
P20040 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC6.8□□□□□ -1.32
P20040 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC6.8□□□□□ -1.32
P20040 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC6.8□□□□□ -1.32
P20040 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC6.8□□□□□ -1.32
P20040 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
P20040 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
P20040 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
P20040 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC6.8□□□□□ -1.32
P20040 Gm10182-201ENSMUST00000178676 273 ntBASIC6.8□□□□□ -1.32
P20040 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC6.8□□□□□ -1.32
P20040 Gm18351-201ENSMUST00000188646 883 ntBASIC6.8□□□□□ -1.32
P20040 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
P20040 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC6.8□□□□□ -1.32
P20040 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC6.8□□□□□ -1.32
P20040 Gm7478-201ENSMUST00000201054 581 ntBASIC6.8□□□□□ -1.32
P20040 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
P20040 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
P20040 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC6.8□□□□□ -1.32
P20040 Gm17995-201ENSMUST00000209266 530 ntBASIC6.8□□□□□ -1.32
P20040 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC6.8□□□□□ -1.32
P20040 Gm3011-201ENSMUST00000215669 582 ntBASIC6.8□□□□□ -1.32
P20040 AC122360.1-201ENSMUST00000217737 624 ntBASIC6.8□□□□□ -1.32
P20040 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
P20040 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
P20040 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
P20040 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
P20040 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms