Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Pinlyp-201ENSMUST00000011776 843 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Gm14358-201ENSMUST00000118458 403 ntBASIC8.36□□□□□ -1.07
Atf6F6VAN0 Gm13358-201ENSMUST00000121427 569 ntBASIC8.36□□□□□ -1.07
Atf6F6VAN0 Gm14848-201ENSMUST00000121850 467 ntBASIC8.36□□□□□ -1.07
Atf6F6VAN0 Gm25179-201ENSMUST00000122632 128 ntBASIC8.36□□□□□ -1.07
Atf6F6VAN0 Gm23773-201ENSMUST00000158985 296 ntBASIC8.36□□□□□ -1.07
Atf6F6VAN0 Gm6695-201ENSMUST00000177264 1172 ntBASIC8.36□□□□□ -1.07
Atf6F6VAN0 Hcfc1r1-202ENSMUST00000179928 597 ntAPPRIS ALT2 TSL 3 BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Gm26968-201ENSMUST00000182894 481 ntBASIC8.36□□□□□ -1.07
Atf6F6VAN0 Gm26974-202ENSMUST00000183263 930 ntTSL 2 BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Gm38051-201ENSMUST00000193740 433 ntBASIC8.36□□□□□ -1.07
Atf6F6VAN0 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC8.36□□□□□ -1.07
Atf6F6VAN0 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Gm42429-201ENSMUST00000198579 558 ntBASIC8.36□□□□□ -1.07
Atf6F6VAN0 Gm43005-201ENSMUST00000199015 648 ntBASIC8.36□□□□□ -1.07
Atf6F6VAN0 Gm18422-201ENSMUST00000203663 1032 ntBASIC8.36□□□□□ -1.07
Atf6F6VAN0 Rarres2-204ENSMUST00000204267 795 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Rarres2-205ENSMUST00000204930 681 ntAPPRIS P3 TSL 2 BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Gm45889-201ENSMUST00000209535 1057 ntBASIC8.36□□□□□ -1.07
Atf6F6VAN0 Gm45549-201ENSMUST00000210180 975 ntBASIC8.36□□□□□ -1.07
Atf6F6VAN0 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Olfr960-203ENSMUST00000216584 1148 ntAPPRIS ALT2 TSL 3 BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Snora57-201ENSMUST00000093658 148 ntBASIC8.36□□□□□ -1.07
Atf6F6VAN0 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Cphx2-201ENSMUST00000168149 1710 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Cphx3-202ENSMUST00000184577 1714 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Atf6F6VAN0 AC164978.1-201ENSMUST00000228608 4011 ntBASIC8.36□□□□□ -1.07
Atf6F6VAN0 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Olfr608-201ENSMUST00000213546 1482 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Zfp82-207ENSMUST00000183190 1906 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Xlr5c-202ENSMUST00000114503 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Abhd3-201ENSMUST00000002549 1885 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Msr1-201ENSMUST00000026021 1424 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Zfp958-201ENSMUST00000073201 1401 ntTSL 5 BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Atf6F6VAN0 Mtfr1-203ENSMUST00000119865 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Zfp791-201ENSMUST00000098550 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Gm12834-201ENSMUST00000121855 2829 ntBASIC8.35□□□□□ -1.07
Atf6F6VAN0 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Olfr380-203ENSMUST00000127789 1536 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC8.35□□□□□ -1.07
Atf6F6VAN0 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Gm4451-201ENSMUST00000186000 1891 ntBASIC8.35□□□□□ -1.07
Atf6F6VAN0 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Gm12875-201ENSMUST00000118745 344 ntBASIC8.35□□□□□ -1.07
Atf6F6VAN0 Gm11765-201ENSMUST00000121173 1205 ntBASIC8.35□□□□□ -1.07
Atf6F6VAN0 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC8.35□□□□□ -1.07
Atf6F6VAN0 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Gm4887-201ENSMUST00000122230 1053 ntBASIC8.35□□□□□ -1.07
Atf6F6VAN0 Gm15077-201ENSMUST00000122344 362 ntBASIC8.35□□□□□ -1.07
Atf6F6VAN0 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC8.35□□□□□ -1.07
Atf6F6VAN0 Gm4868-201ENSMUST00000164138 789 ntBASIC8.35□□□□□ -1.07
Atf6F6VAN0 Mir8110-201ENSMUST00000183771 97 ntBASIC8.35□□□□□ -1.07
Atf6F6VAN0 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Abracl-201ENSMUST00000020002 846 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Ceacam1-204ENSMUST00000205308 993 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Gm7424-201ENSMUST00000206919 902 ntBASIC8.35□□□□□ -1.07
Atf6F6VAN0 Gm2734-201ENSMUST00000208561 743 ntBASIC8.35□□□□□ -1.07
Atf6F6VAN0 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC8.35□□□□□ -1.07
Atf6F6VAN0 AC142407.1-201ENSMUST00000214371 494 ntTSL 5 BASIC8.35□□□□□ -1.07
Atf6F6VAN0 AC159312.1-201ENSMUST00000221508 856 ntTSL 2 BASIC8.35□□□□□ -1.07
Atf6F6VAN0 CT009494.1-201ENSMUST00000225121 1213 ntBASIC8.35□□□□□ -1.07
Atf6F6VAN0 Gm8623-201ENSMUST00000071573 436 ntBASIC8.35□□□□□ -1.07
Atf6F6VAN0 Klk4-201ENSMUST00000007161 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Fabp5l2-201ENSMUST00000072582 408 ntBASIC8.35□□□□□ -1.07
Atf6F6VAN0 Olfr1418-201ENSMUST00000079875 1072 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Atf6F6VAN0 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Atf6F6VAN0 6330409D20Rik-201ENSMUST00000009695 1119 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Npnt-201ENSMUST00000042729 3601 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Gm37210-201ENSMUST00000192484 2004 ntBASIC8.35□□□□□ -1.07
Atf6F6VAN0 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Atf6F6VAN0 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Rnase13-201ENSMUST00000089771 1412 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Gm43409-201ENSMUST00000195921 2162 ntTSL 5 BASIC8.35□□□□□ -1.07
Atf6F6VAN0 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms