Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Brd8-204ENSMUST00000115766 4258 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Ston1-205ENSMUST00000150023 3231 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Mbtps1-202ENSMUST00000098362 4336 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Fgr-201ENSMUST00000030693 3363 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm10482-202ENSMUST00000189825 2287 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Pou2f1-201ENSMUST00000027850 2258 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Ighv1-85-201ENSMUST00000103552 351 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm11845-201ENSMUST00000117886 327 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Rps8-ps2-201ENSMUST00000118709 624 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Rpl7l1-ps1-201ENSMUST00000118822 725 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm12529-201ENSMUST00000119529 268 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm14438-201ENSMUST00000121572 624 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm12751-201ENSMUST00000122336 381 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Ear6-202ENSMUST00000169070 893 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm27315-201ENSMUST00000183977 154 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm37619-201ENSMUST00000193219 724 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Ighv1-13-202ENSMUST00000195668 350 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm19764-201ENSMUST00000203630 649 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm8268-201ENSMUST00000209683 458 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 AC154417.1-201ENSMUST00000223876 476 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 AC115735.3-201ENSMUST00000227757 513 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 AC163646.3-201ENSMUST00000228879 772 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm5292-201ENSMUST00000073317 580 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm23970-201ENSMUST00000083319 107 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Hba-a1-201ENSMUST00000093209 699 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Olfr1331-201ENSMUST00000094831 954 ntAPPRIS P2 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Mef2c-218ENSMUST00000198199 2589 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Hk1-203ENSMUST00000116238 3851 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Brip1os-202ENSMUST00000143819 2604 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm15964-201ENSMUST00000138207 2745 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Tro-205ENSMUST00000151403 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 L3mbtl3-202ENSMUST00000105519 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Atxn7l1-210ENSMUST00000144586 3042 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 1700074P13Rik-202ENSMUST00000122181 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm26649-201ENSMUST00000181595 3196 ntTSL 5 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 1700001L19Rik-201ENSMUST00000022007 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Eif3l-201ENSMUST00000040518 1893 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Esd-201ENSMUST00000022573 1988 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Mill2-206ENSMUST00000228493 2043 ntAPPRIS P4 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm43750-201ENSMUST00000199027 2493 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm1070-201ENSMUST00000114185 2874 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Pde10a-201ENSMUST00000024647 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gpcpd1-201ENSMUST00000028822 3179 ntTSL 5 BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Zfp800-201ENSMUST00000035930 3881 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Pla2g2d-202ENSMUST00000105806 1206 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Snord88c-201ENSMUST00000116853 90 ntBASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm14879-201ENSMUST00000117308 507 ntBASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm15110-201ENSMUST00000117545 881 ntBASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm11905-201ENSMUST00000117653 678 ntBASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm14007-201ENSMUST00000118288 210 ntBASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm12192-201ENSMUST00000120146 487 ntBASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm15925-201ENSMUST00000120641 1881 ntBASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm14212-201ENSMUST00000122023 826 ntBASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm11243-201ENSMUST00000122335 394 ntBASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Olfr1110-202ENSMUST00000152758 3159 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm2564-201ENSMUST00000166898 707 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 BC048671-202ENSMUST00000167550 890 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Rps6ka1-206ENSMUST00000168974 2982 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm21909-201ENSMUST00000178260 439 ntBASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm21241-201ENSMUST00000179551 934 ntBASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm27001-201ENSMUST00000182252 936 ntBASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Rpap3-ps2-201ENSMUST00000184741 2161 ntBASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Rbm6-ps2-201ENSMUST00000186440 1534 ntBASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm28489-201ENSMUST00000186655 316 ntBASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm29357-201ENSMUST00000186877 698 ntBASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Pcdhb7Q8CDY9 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms