Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Gm6750-201ENSMUST00000189273 268 ntBASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Gm7891-201ENSMUST00000190284 843 ntBASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Gm45255-201ENSMUST00000209943 811 ntBASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Gm19154-201ENSMUST00000223330 940 ntBASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Gm2531-201ENSMUST00000075609 512 ntBASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
Ccdc38Q8CDN8 AC165260.6-202ENSMUST00000224959 1958 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm44898-201ENSMUST00000205934 2223 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 AC156636.1-201ENSMUST00000218639 2229 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm43158-201ENSMUST00000198484 1555 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Olfr353-201ENSMUST00000100149 936 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm13255-201ENSMUST00000117255 547 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm12024-201ENSMUST00000118819 1253 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm5761-201ENSMUST00000119238 834 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm15763-201ENSMUST00000120136 403 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm15989-201ENSMUST00000121895 498 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm23663-201ENSMUST00000158045 80 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm5973-201ENSMUST00000178542 496 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm5205-201ENSMUST00000182253 1003 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm27288-201ENSMUST00000184215 80 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm27597-201ENSMUST00000184365 80 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm27506-201ENSMUST00000184558 80 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm27529-201ENSMUST00000184975 80 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm27907-201ENSMUST00000185101 80 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm17867-201ENSMUST00000188981 391 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm37371-201ENSMUST00000194837 392 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm5590-201ENSMUST00000059110 345 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm9761-201ENSMUST00000075650 492 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 AC139758.3-201ENSMUST00000226853 2704 ntBASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc38Q8CDN8 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Ccdc38Q8CDN8 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms