Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 4933432K03Rik-201ENSMUST00000205739 1247 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Gm45399-201ENSMUST00000209955 1016 ntBASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Gm4780-201ENSMUST00000213206 1242 ntBASIC9.07□□□□□ -0.96
Vps53Q8CCB4 AC157571.1-201ENSMUST00000222014 520 ntBASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Gm37611-201ENSMUST00000195250 2028 ntBASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Gm9125-202ENSMUST00000180746 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Gm9117-202ENSMUST00000193529 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Gm24334-201ENSMUST00000104210 128 ntBASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Gm23527-201ENSMUST00000104570 130 ntBASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Gm27401-201ENSMUST00000184052 173 ntBASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Gm17530-201ENSMUST00000194336 472 ntBASIC9.06□□□□□ -0.96
Vps53Q8CCB4 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Gm33096-201ENSMUST00000210189 493 ntBASIC9.06□□□□□ -0.96
Vps53Q8CCB4 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 AC124715.2-201ENSMUST00000226762 617 ntBASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 AC061963.2-201ENSMUST00000213541 2739 ntBASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Vps53Q8CCB4 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Gm43679-201ENSMUST00000197051 3677 ntBASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Olfr467-202ENSMUST00000208563 1852 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Olfr467-203ENSMUST00000214253 1855 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Gm25593-201ENSMUST00000102272 96 ntBASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Gm8624-201ENSMUST00000118083 432 ntBASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Gm23392-201ENSMUST00000157580 113 ntBASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Gm9556-201ENSMUST00000182938 940 ntBASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Gm28193-201ENSMUST00000189863 615 ntBASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Gm4536-201ENSMUST00000209157 542 ntBASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Gm45574-201ENSMUST00000210921 331 ntBASIC9.05□□□□□ -0.96
Vps53Q8CCB4 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 CT010431.1-201ENSMUST00000221249 1080 ntBASIC9.05□□□□□ -0.96
Vps53Q8CCB4 AC154634.3-201ENSMUST00000224589 736 ntBASIC9.05□□□□□ -0.96
Vps53Q8CCB4 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Vps53Q8CCB4 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms