Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Usp47Q8BY87 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Gm5903-201ENSMUST00000121836 2325 ntBASIC10.79□□□□□ -0.68
Usp47Q8BY87 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Usp47Q8BY87 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC10.79□□□□□ -0.68
Usp47Q8BY87 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Itsn1-208ENSMUST00000114002 14012 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Gm37163-201ENSMUST00000195439 1690 ntBASIC10.79□□□□□ -0.68
Usp47Q8BY87 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Usp47Q8BY87 Gm12661-201ENSMUST00000118780 3335 ntBASIC10.78□□□□□ -0.68
Usp47Q8BY87 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Mir503-201ENSMUST00000102168 71 ntBASIC10.78□□□□□ -0.68
Usp47Q8BY87 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Gm15481-201ENSMUST00000120264 539 ntBASIC10.78□□□□□ -0.68
Usp47Q8BY87 Gm12402-201ENSMUST00000120536 334 ntBASIC10.78□□□□□ -0.68
Usp47Q8BY87 Gm11895-201ENSMUST00000122165 467 ntBASIC10.78□□□□□ -0.68
Usp47Q8BY87 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC10.78□□□□□ -0.68
Usp47Q8BY87 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Gm4308-201ENSMUST00000179735 914 ntBASIC10.78□□□□□ -0.68
Usp47Q8BY87 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Gm21181-201ENSMUST00000186249 330 ntBASIC10.78□□□□□ -0.68
Usp47Q8BY87 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Usp47Q8BY87 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC10.78□□□□□ -0.68
Usp47Q8BY87 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 AC238940.2-201ENSMUST00000224202 330 ntBASIC10.78□□□□□ -0.68
Usp47Q8BY87 CT009550.2-201ENSMUST00000228851 399 ntBASIC10.78□□□□□ -0.68
Usp47Q8BY87 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Gm21043-201ENSMUST00000199316 1517 ntBASIC10.78□□□□□ -0.68
Usp47Q8BY87 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC10.78□□□□□ -0.68
Usp47Q8BY87 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC10.78□□□□□ -0.68
Usp47Q8BY87 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Gm39244-201ENSMUST00000209663 1940 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Gm38300-201ENSMUST00000194245 1870 ntBASIC10.78□□□□□ -0.68
Usp47Q8BY87 AC121870.2-201ENSMUST00000214343 1870 ntBASIC10.78□□□□□ -0.68
Usp47Q8BY87 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Usp47Q8BY87 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Usp47Q8BY87 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC10.77□□□□□ -0.68
Usp47Q8BY87 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC10.77□□□□□ -0.68
Usp47Q8BY87 Gm26784-201ENSMUST00000181666 410 ntBASIC10.77□□□□□ -0.68
Usp47Q8BY87 Gm2505-201ENSMUST00000200413 825 ntBASIC10.77□□□□□ -0.68
Usp47Q8BY87 Gm43812-202ENSMUST00000202701 581 ntBASIC10.77□□□□□ -0.68
Usp47Q8BY87 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC10.77□□□□□ -0.68
Usp47Q8BY87 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC10.77□□□□□ -0.68
Usp47Q8BY87 CT010472.1-201ENSMUST00000224000 704 ntBASIC10.77□□□□□ -0.68
Usp47Q8BY87 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Usp47Q8BY87 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Usp47Q8BY87 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Usp47Q8BY87 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Usp47Q8BY87 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Usp47Q8BY87 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Usp47Q8BY87 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Usp47Q8BY87 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC10.77□□□□□ -0.69
Usp47Q8BY87 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC10.77□□□□□ -0.69
Usp47Q8BY87 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Usp47Q8BY87 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Usp47Q8BY87 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Usp47Q8BY87 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Usp47Q8BY87 Mettl14-202ENSMUST00000090371 7197 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Usp47Q8BY87 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Usp47Q8BY87 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Usp47Q8BY87 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Usp47Q8BY87 Gm23701-201ENSMUST00000103893 110 ntBASIC10.77□□□□□ -0.69
Usp47Q8BY87 Gm24893-201ENSMUST00000122745 369 ntBASIC10.77□□□□□ -0.69
Usp47Q8BY87 Gm24139-201ENSMUST00000122780 288 ntBASIC10.77□□□□□ -0.69
Usp47Q8BY87 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC10.77□□□□□ -0.69
Usp47Q8BY87 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC10.77□□□□□ -0.69
Usp47Q8BY87 Mir6403-201ENSMUST00000185007 129 ntBASIC10.77□□□□□ -0.69
Usp47Q8BY87 Gm7369-201ENSMUST00000192738 936 ntBASIC10.77□□□□□ -0.69
Usp47Q8BY87 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Usp47Q8BY87 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms