Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 Mmp19-201ENSMUST00000026411 3402 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Tmcc1-209ENSMUST00000173548 1622 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Lrtm1-202ENSMUST00000224708 1646 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Gm16103-201ENSMUST00000163003 1279 ntBASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Gm17205-201ENSMUST00000168370 1207 ntBASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Gm27866-201ENSMUST00000184459 171 ntBASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Ighv1-21-201ENSMUST00000194856 351 ntBASIC8.23□□□□□ -1.09
Trim17Q7TPM3 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Gm4605-201ENSMUST00000203148 625 ntBASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Gm45394-201ENSMUST00000209240 1175 ntBASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Gm45401-201ENSMUST00000209456 733 ntBASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 AC163295.2-202ENSMUST00000227763 1053 ntBASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 E030024N20Rik-201ENSMUST00000075293 494 ntBASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Gm43679-201ENSMUST00000197051 3677 ntBASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Gm45201-201ENSMUST00000207187 2679 ntBASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Gm26802-201ENSMUST00000181066 2144 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Snhg14-206ENSMUST00000187666 2517 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim17Q7TPM3 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC8.23□□□□□ -1.09
Trim17Q7TPM3 AC154347.1-201ENSMUST00000221358 3105 ntBASIC8.23□□□□□ -1.09
Trim17Q7TPM3 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm44007-201ENSMUST00000203845 2189 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Serinc4-201ENSMUST00000056312 2551 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Elovl4-201ENSMUST00000034796 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm38014-201ENSMUST00000193349 2612 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm44792-201ENSMUST00000207008 1628 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm42490-201ENSMUST00000198595 2064 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Sncaip-202ENSMUST00000115410 3585 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Chrdl2-202ENSMUST00000107084 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm24462-201ENSMUST00000102430 106 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm13768-201ENSMUST00000116469 929 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm14201-201ENSMUST00000117627 289 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm12611-201ENSMUST00000119452 1037 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm14328-201ENSMUST00000122178 408 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 B430319H21Rik-201ENSMUST00000123420 734 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Mir1968-201ENSMUST00000157429 68 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Dnajc5b-204ENSMUST00000165693 955 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm26269-201ENSMUST00000180144 126 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm5251-201ENSMUST00000188959 472 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm37432-201ENSMUST00000195294 341 ntTSL 2 BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm43243-201ENSMUST00000199964 278 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm44147-201ENSMUST00000204658 94 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm31663-202ENSMUST00000208481 1190 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm45873-201ENSMUST00000211865 1915 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm16050-201ENSMUST00000160626 2363 ntTSL 3 BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm37968-201ENSMUST00000195131 3201 ntBASIC8.22□□□□□ -1.09
Trim17Q7TPM3 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Trim17Q7TPM3 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim17Q7TPM3 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Trim17Q7TPM3 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim17Q7TPM3 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Trim17Q7TPM3 Gm26520-201ENSMUST00000180719 1423 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Trim17Q7TPM3 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC8.21□□□□□ -1.09
Trim17Q7TPM3 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim17Q7TPM3 Gm43537-201ENSMUST00000199064 3110 ntBASIC8.21□□□□□ -1.09
Trim17Q7TPM3 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Trim17Q7TPM3 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Trim17Q7TPM3 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.21□□□□□ -1.09
Trim17Q7TPM3 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim17Q7TPM3 Nrxn3-202ENSMUST00000110130 3654 ntTSL 2 BASIC8.21□□□□□ -1.09
Trim17Q7TPM3 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms