Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC8.23□□□□□ -1.09
NcanP55066 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 Gm42424-201ENSMUST00000198319 376 ntBASIC8.23□□□□□ -1.09
NcanP55066 Gm4525-201ENSMUST00000198831 254 ntBASIC8.23□□□□□ -1.09
NcanP55066 Gm34149-201ENSMUST00000203547 304 ntBASIC8.23□□□□□ -1.09
NcanP55066 Olfr471-201ENSMUST00000210091 936 ntBASIC8.23□□□□□ -1.09
NcanP55066 AC144783.1-201ENSMUST00000219103 960 ntBASIC8.23□□□□□ -1.09
NcanP55066 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
NcanP55066 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
NcanP55066 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 Tdrd1-203ENSMUST00000111606 4914 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 I830077J02Rik-201ENSMUST00000098758 2599 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC8.23□□□□□ -1.09
NcanP55066 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC8.23□□□□□ -1.09
NcanP55066 Bank1-203ENSMUST00000196159 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC8.23□□□□□ -1.09
NcanP55066 St6gal1-206ENSMUST00000178797 4177 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
NcanP55066 Phf8-201ENSMUST00000046950 5728 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
NcanP55066 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 Inpp5d-209ENSMUST00000168783 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 Olfr531-202ENSMUST00000216053 2330 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
NcanP55066 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
NcanP55066 Gm12743-201ENSMUST00000126668 3700 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 Clasp1-221ENSMUST00000191823 3916 ntTSL 5 BASIC8.22□□□□□ -1.09
NcanP55066 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NcanP55066 Gm8428-201ENSMUST00000159919 1784 ntBASIC8.22□□□□□ -1.09
NcanP55066 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NcanP55066 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
NcanP55066 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
NcanP55066 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NcanP55066 Gm12834-201ENSMUST00000121855 2829 ntBASIC8.22□□□□□ -1.09
NcanP55066 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC8.22□□□□□ -1.09
NcanP55066 Ctnnd1-221ENSMUST00000111695 6344 ntTSL 5 BASIC8.22□□□□□ -1.09
NcanP55066 Washc2-201ENSMUST00000036759 4307 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NcanP55066 Gm10556-201ENSMUST00000180904 3906 ntTSL 2 BASIC8.22□□□□□ -1.09
NcanP55066 Heatr9-201ENSMUST00000019069 1875 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
NcanP55066 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NcanP55066 Gm38249-201ENSMUST00000192560 2321 ntBASIC8.22□□□□□ -1.09
NcanP55066 Gm12635-201ENSMUST00000117285 752 ntBASIC8.22□□□□□ -1.09
NcanP55066 Gm13130-201ENSMUST00000119195 1166 ntBASIC8.22□□□□□ -1.09
NcanP55066 Gm15194-201ENSMUST00000120453 434 ntBASIC8.22□□□□□ -1.09
NcanP55066 Gm15538-201ENSMUST00000121410 313 ntBASIC8.22□□□□□ -1.09
NcanP55066 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NcanP55066 Gm24327-201ENSMUST00000175108 78 ntBASIC8.22□□□□□ -1.09
NcanP55066 Mir7028-201ENSMUST00000185016 64 ntBASIC8.22□□□□□ -1.09
NcanP55066 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC8.22□□□□□ -1.09
NcanP55066 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC8.22□□□□□ -1.09
NcanP55066 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC8.22□□□□□ -1.09
NcanP55066 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC8.22□□□□□ -1.09
NcanP55066 Gm45506-201ENSMUST00000211620 280 ntBASIC8.22□□□□□ -1.09
NcanP55066 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC8.22□□□□□ -1.09
NcanP55066 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC8.22□□□□□ -1.09
NcanP55066 AC127224.1-201ENSMUST00000218094 453 ntBASIC8.22□□□□□ -1.09
NcanP55066 AC154642.1-201ENSMUST00000224173 740 ntBASIC8.22□□□□□ -1.09
NcanP55066 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
NcanP55066 Gm5446-201ENSMUST00000091762 784 ntBASIC8.22□□□□□ -1.09
NcanP55066 Defa29-201ENSMUST00000098890 508 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NcanP55066 Hgd-203ENSMUST00000160847 1702 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NcanP55066 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC8.22□□□□□ -1.09
NcanP55066 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NcanP55066 Gm43465-201ENSMUST00000200367 2802 ntBASIC8.22□□□□□ -1.09
NcanP55066 A630001O12Rik-201ENSMUST00000212914 2182 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NcanP55066 Abcc3-206ENSMUST00000178136 5005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
NcanP55066 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC8.22□□□□□ -1.09
NcanP55066 Gm5316-202ENSMUST00000185734 3096 ntBASIC8.22□□□□□ -1.09
NcanP55066 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
NcanP55066 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
NcanP55066 Rimbp2-207ENSMUST00000200470 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
NcanP55066 Tmem268-202ENSMUST00000080336 3630 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NcanP55066 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NcanP55066 CT009723.1-201ENSMUST00000215057 1803 ntTSL 5 BASIC8.22□□□□□ -1.09
NcanP55066 Gm44289-201ENSMUST00000204144 1390 ntBASIC8.22□□□□□ -1.09
NcanP55066 Ces1e-201ENSMUST00000034173 2073 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
NcanP55066 Slc4a2-203ENSMUST00000115049 3924 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
NcanP55066 Syt17-201ENSMUST00000081574 2764 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
NcanP55066 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
NcanP55066 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
NcanP55066 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
NcanP55066 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
NcanP55066 Fam161b-201ENSMUST00000021659 3357 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
NcanP55066 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
NcanP55066 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
NcanP55066 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
NcanP55066 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
NcanP55066 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
NcanP55066 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
NcanP55066 Glt8d2-201ENSMUST00000020485 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
NcanP55066 Gucy2d-203ENSMUST00000206435 3634 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
NcanP55066 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.09
NcanP55066 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
NcanP55066 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
NcanP55066 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
NcanP55066 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC8.21□□□□□ -1.09
NcanP55066 Gm45714-201ENSMUST00000211466 2722 ntBASIC8.21□□□□□ -1.09
NcanP55066 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
NcanP55066 Fhl1-205ENSMUST00000114773 2298 ntTSL 5 BASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms