Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Rims1-207ENSMUST00000164877 2294 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LtbrP50284 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
LtbrP50284 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC10.18□□□□□ -0.78
LtbrP50284 Acpp-202ENSMUST00000112590 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LtbrP50284 AY702103-202ENSMUST00000180996 5876 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LtbrP50284 CT009550.4-202ENSMUST00000227369 3076 ntBASIC10.18□□□□□ -0.78
LtbrP50284 Gm26903-201ENSMUST00000180749 4583 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Klhl28-201ENSMUST00000021331 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Wfikkn2-201ENSMUST00000061469 3516 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 A730065G17Rik-201ENSMUST00000217082 3335 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Gramd1c-202ENSMUST00000114677 3271 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Gm36949-201ENSMUST00000192487 2327 ntBASIC10.17□□□□□ -0.78
LtbrP50284 Cdhr2-201ENSMUST00000037145 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Fbxo11-201ENSMUST00000005504 4019 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
LtbrP50284 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
LtbrP50284 Olfr155-202ENSMUST00000107860 3480 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
LtbrP50284 Scmh1-204ENSMUST00000106301 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Rnf19a-201ENSMUST00000022890 4277 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Gm23527-201ENSMUST00000104570 130 ntBASIC10.17□□□□□ -0.78
LtbrP50284 Cd59b-203ENSMUST00000111131 555 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
LtbrP50284 Apod-202ENSMUST00000115230 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Gm13198-201ENSMUST00000119322 826 ntBASIC10.17□□□□□ -0.78
LtbrP50284 Gm14360-201ENSMUST00000120670 393 ntBASIC10.17□□□□□ -0.78
LtbrP50284 Gm14982-201ENSMUST00000121102 442 ntBASIC10.17□□□□□ -0.78
LtbrP50284 Gm14907-201ENSMUST00000121948 854 ntBASIC10.17□□□□□ -0.78
LtbrP50284 E230016K23Rik-201ENSMUST00000125626 2139 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Gm9498-201ENSMUST00000140849 291 ntBASIC10.17□□□□□ -0.78
LtbrP50284 Gm23897-201ENSMUST00000158110 158 ntBASIC10.17□□□□□ -0.78
LtbrP50284 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
LtbrP50284 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
LtbrP50284 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC10.17□□□□□ -0.78
LtbrP50284 Txn-ps1-201ENSMUST00000186385 309 ntBASIC10.17□□□□□ -0.78
LtbrP50284 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC10.17□□□□□ -0.78
LtbrP50284 Gm36932-201ENSMUST00000195226 929 ntBASIC10.17□□□□□ -0.78
LtbrP50284 Gm8891-201ENSMUST00000198546 832 ntBASIC10.17□□□□□ -0.78
LtbrP50284 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC10.17□□□□□ -0.78
LtbrP50284 Gm6749-201ENSMUST00000203838 405 ntBASIC10.17□□□□□ -0.78
LtbrP50284 Gm20074-201ENSMUST00000208144 484 ntBASIC10.17□□□□□ -0.78
LtbrP50284 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC10.17□□□□□ -0.78
LtbrP50284 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 AC107663.3-201ENSMUST00000225873 601 ntBASIC10.17□□□□□ -0.78
LtbrP50284 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Olfr1238-201ENSMUST00000099781 949 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
LtbrP50284 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
LtbrP50284 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Tmem19-209ENSMUST00000219890 2949 ntTSL 5 BASIC10.17□□□□□ -0.78
LtbrP50284 Ncald-201ENSMUST00000090150 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Vps8-204ENSMUST00000117598 4935 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Arsg-201ENSMUST00000020928 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Gprc5c-202ENSMUST00000053361 3667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 AC127596.1-201ENSMUST00000214721 2415 ntBASIC10.17□□□□□ -0.78
LtbrP50284 AC114002.1-201ENSMUST00000218097 2409 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Cyp2d22-201ENSMUST00000023083 2771 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Xndc1-202ENSMUST00000106950 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Nbr1-202ENSMUST00000103098 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
LtbrP50284 Rhof-204ENSMUST00000186469 4241 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Crxos-202ENSMUST00000125993 2246 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Slc14a1-202ENSMUST00000160292 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LtbrP50284 Ighe-202ENSMUST00000223335 1460 ntAPPRIS P5 BASIC10.17□□□□□ -0.78
LtbrP50284 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
LtbrP50284 Pus10-202ENSMUST00000058163 3559 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LtbrP50284 Eci2-213ENSMUST00000178421 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
LtbrP50284 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LtbrP50284 Efcab1-201ENSMUST00000090277 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LtbrP50284 A230059L01Rik-201ENSMUST00000126596 2813 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LtbrP50284 Zcchc12-203ENSMUST00000115257 2051 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
LtbrP50284 Sox5-204ENSMUST00000111748 1734 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LtbrP50284 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LtbrP50284 Prokr1-201ENSMUST00000050887 4075 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LtbrP50284 Nip7-201ENSMUST00000034392 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LtbrP50284 AC159624.1-201ENSMUST00000217762 1344 ntBASIC10.16□□□□□ -0.78
LtbrP50284 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LtbrP50284 Diexf-201ENSMUST00000085555 5570 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LtbrP50284 Ccdc116-201ENSMUST00000023452 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LtbrP50284 Klf6-201ENSMUST00000000080 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LtbrP50284 Thnsl1-201ENSMUST00000054591 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LtbrP50284 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
LtbrP50284 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
LtbrP50284 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
LtbrP50284 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC10.16□□□□□ -0.78
LtbrP50284 Gm14777-201ENSMUST00000116306 176 ntBASIC10.16□□□□□ -0.78
LtbrP50284 Gm24835-201ENSMUST00000116777 111 ntBASIC10.16□□□□□ -0.78
LtbrP50284 Gm5644-201ENSMUST00000122039 465 ntBASIC10.16□□□□□ -0.78
LtbrP50284 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LtbrP50284 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
LtbrP50284 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
LtbrP50284 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
LtbrP50284 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC10.16□□□□□ -0.78
LtbrP50284 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC10.16□□□□□ -0.78
LtbrP50284 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
LtbrP50284 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms