Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 AC166822.2-201ENSMUST00000228746 275 ntBASIC8.23□□□□□ -1.09
Usp4P35123 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Usp4P35123 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 Cutal-202ENSMUST00000047447 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Usp4P35123 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Usp4P35123 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Usp4P35123 n-R5s28-201ENSMUST00000082814 119 ntBASIC8.23□□□□□ -1.09
Usp4P35123 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Usp4P35123 Gm15433-201ENSMUST00000097671 891 ntBASIC8.23□□□□□ -1.09
Usp4P35123 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
Usp4P35123 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 Gm37953-201ENSMUST00000195293 1884 ntBASIC8.23□□□□□ -1.09
Usp4P35123 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Usp4P35123 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 Olfr221-204ENSMUST00000216188 2871 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Usp4P35123 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 2700046A07Rik-202ENSMUST00000067450 2101 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Usp4P35123 Gm43873-201ENSMUST00000204505 3938 ntBASIC8.22□□□□□ -1.09
Usp4P35123 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Usp4P35123 Gm2098-201ENSMUST00000189146 1763 ntBASIC8.22□□□□□ -1.09
Usp4P35123 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp4P35123 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Usp4P35123 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Usp4P35123 Gm44652-201ENSMUST00000208648 2854 ntBASIC8.22□□□□□ -1.09
Usp4P35123 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC8.22□□□□□ -1.09
Usp4P35123 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp4P35123 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Gm12883-201ENSMUST00000117867 364 ntBASIC8.22□□□□□ -1.09
Usp4P35123 Gm15763-201ENSMUST00000120136 403 ntBASIC8.22□□□□□ -1.09
Usp4P35123 Gm14048-201ENSMUST00000121864 1268 ntBASIC8.22□□□□□ -1.09
Usp4P35123 Gm12780-201ENSMUST00000122458 645 ntBASIC8.22□□□□□ -1.09
Usp4P35123 Gm5834-201ENSMUST00000126680 1026 ntBASIC8.22□□□□□ -1.09
Usp4P35123 Defa-ps3-201ENSMUST00000142705 282 ntBASIC8.22□□□□□ -1.09
Usp4P35123 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Gm17235-201ENSMUST00000169128 964 ntBASIC8.22□□□□□ -1.09
Usp4P35123 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Usp4P35123 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC8.22□□□□□ -1.09
Usp4P35123 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC8.22□□□□□ -1.09
Usp4P35123 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC8.22□□□□□ -1.09
Usp4P35123 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp4P35123 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp4P35123 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp4P35123 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp4P35123 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp4P35123 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp4P35123 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp4P35123 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp4P35123 Gm28925-201ENSMUST00000188586 168 ntBASIC8.22□□□□□ -1.09
Usp4P35123 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp4P35123 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp4P35123 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp4P35123 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp4P35123 Gm36996-201ENSMUST00000194466 250 ntBASIC8.22□□□□□ -1.09
Usp4P35123 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC8.22□□□□□ -1.09
Usp4P35123 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC8.22□□□□□ -1.09
Usp4P35123 Gm18973-201ENSMUST00000205814 511 ntBASIC8.22□□□□□ -1.09
Usp4P35123 Gm45889-201ENSMUST00000209535 1057 ntBASIC8.22□□□□□ -1.09
Usp4P35123 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC8.22□□□□□ -1.09
Usp4P35123 AL645704.1-201ENSMUST00000221642 604 ntBASIC8.22□□□□□ -1.09
Usp4P35123 AC159205.7-201ENSMUST00000225988 692 ntBASIC8.22□□□□□ -1.09
Usp4P35123 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp4P35123 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp4P35123 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Grip1-204ENSMUST00000105261 3608 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Gm21043-201ENSMUST00000199316 1517 ntBASIC8.22□□□□□ -1.09
Usp4P35123 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Usp4P35123 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Usp4P35123 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Gm3742-201ENSMUST00000220907 1391 ntBASIC8.22□□□□□ -1.09
Usp4P35123 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp4P35123 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Usp4P35123 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Usp4P35123 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Usp4P35123 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Usp4P35123 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Usp4P35123 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC8.21□□□□□ -1.09
Usp4P35123 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Usp4P35123 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
Usp4P35123 Grik1-210ENSMUST00000228034 2708 ntBASIC8.21□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms