Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Adamtsl1-209ENSMUST00000141889 7805 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Hoxd9P28357 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hoxd9P28357 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hoxd9P28357 Gm28989-201ENSMUST00000187867 1613 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Hoxd9P28357 Enox2-205ENSMUST00000114918 3226 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Hoxd9P28357 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Hoxd9P28357 Washc2-201ENSMUST00000036759 4307 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hoxd9P28357 Rnf122-201ENSMUST00000046941 3582 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hoxd9P28357 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Hoxd9P28357 Olfr444-202ENSMUST00000204092 1472 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Hoxd9P28357 AC079245.1-201ENSMUST00000215680 1454 ntBASIC8.06□□□□□ -1.12
Hoxd9P28357 Icosl-201ENSMUST00000105393 2814 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hoxd9P28357 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC8.06□□□□□ -1.12
Hoxd9P28357 Tmprss11g-202ENSMUST00000140095 2314 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Hoxd9P28357 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC8.06□□□□□ -1.12
Hoxd9P28357 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Hoxd9P28357 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Hoxd9P28357 Pnma2-202ENSMUST00000122431 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 Adgrl3-209ENSMUST00000119385 4905 ntTSL 5 BASIC8.05□□□□□ -1.12
Hoxd9P28357 Ctnnd1-209ENSMUST00000111678 5870 ntTSL 5 BASIC8.05□□□□□ -1.12
Hoxd9P28357 Cyp4v3-201ENSMUST00000095328 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 AC154461.6-201ENSMUST00000224815 2630 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm42848-201ENSMUST00000201477 2022 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC8.05□□□□□ -1.12
Hoxd9P28357 Prune2-207ENSMUST00000225351 2115 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 Acad12-201ENSMUST00000041252 3881 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm7364-201ENSMUST00000188760 1501 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Abhd3-201ENSMUST00000002549 1885 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 9330162B11Rik-201ENSMUST00000195397 2212 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Hoxd9P28357 C5ar2-202ENSMUST00000171425 3381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 Tpbpa-201ENSMUST00000021885 1621 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 2310040G07Rik-201ENSMUST00000101090 478 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Fam166b-202ENSMUST00000107928 762 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm12421-201ENSMUST00000119071 307 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm12312-201ENSMUST00000120351 644 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm9001-201ENSMUST00000121642 399 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm15873-201ENSMUST00000123390 761 ntTSL 3 BASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC8.05□□□□□ -1.12
Hoxd9P28357 1700003M07Rik-201ENSMUST00000139884 541 ntTSL 2 BASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm13548-201ENSMUST00000144688 385 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm14061-201ENSMUST00000155923 1007 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm24724-201ENSMUST00000158230 107 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm16300-201ENSMUST00000160031 1279 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Ear-ps10-201ENSMUST00000161871 460 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm17158-201ENSMUST00000168150 493 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Vmn2r-ps41-201ENSMUST00000173587 980 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 1110059E24Rik-202ENSMUST00000177577 599 ntTSL 3 BASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm37771-201ENSMUST00000193121 265 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 4930474B08Rik-201ENSMUST00000194161 837 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC8.05□□□□□ -1.12
Hoxd9P28357 4933417G07Rik-201ENSMUST00000199681 1137 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm43578-201ENSMUST00000201250 459 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm42850-201ENSMUST00000202094 201 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm44243-201ENSMUST00000204323 692 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm18840-201ENSMUST00000204553 506 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm18907-201ENSMUST00000209719 932 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm45323-201ENSMUST00000209853 413 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 AC124577.1-201ENSMUST00000214044 487 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 AC132384.1-201ENSMUST00000219908 1195 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 AC155269.1-201ENSMUST00000220843 769 ntTSL 5 BASIC8.05□□□□□ -1.12
Hoxd9P28357 AC239878.2-201ENSMUST00000224048 464 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 AC133189.3-201ENSMUST00000226269 878 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 AC107453.2-201ENSMUST00000227714 655 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 CT030684.2-201ENSMUST00000228946 826 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm6187-201ENSMUST00000040649 960 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Hoxd9P28357 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Hoxd9P28357 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Hoxd9P28357 Asic5-202ENSMUST00000107736 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 AU021092-201ENSMUST00000050160 1363 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 4930433I11Rik-202ENSMUST00000206529 2963 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Hoxd9P28357 CT009723.1-201ENSMUST00000215057 1803 ntTSL 5 BASIC8.05□□□□□ -1.12
Hoxd9P28357 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 Ceacam1-202ENSMUST00000098668 1478 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 Wdr59-203ENSMUST00000211981 3618 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 Gm8995-202ENSMUST00000208417 3490 ntBASIC8.05□□□□□ -1.12
Hoxd9P28357 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 Trub1-202ENSMUST00000026073 3795 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hoxd9P28357 Wdr76-202ENSMUST00000099473 2315 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm11239-201ENSMUST00000171348 1322 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm11237-201ENSMUST00000178319 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm11236-201ENSMUST00000180092 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Idh3g-201ENSMUST00000052761 1331 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm428-201ENSMUST00000084475 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hoxd9P28357 Gm11238-201ENSMUST00000084479 1323 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Hoxd9P28357 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms