Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Npr3-204ENSMUST00000228489 1969 ntBASIC6.83□□□□□ -1.32
P20040 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
P20040 Gm22934-201ENSMUST00000103961 132 ntBASIC6.83□□□□□ -1.32
P20040 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
P20040 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC6.83□□□□□ -1.32
P20040 Gm13407-201ENSMUST00000118256 360 ntBASIC6.83□□□□□ -1.32
P20040 Gm11997-201ENSMUST00000118697 313 ntBASIC6.83□□□□□ -1.32
P20040 Myl1-202ENSMUST00000119429 803 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
P20040 Gm13323-201ENSMUST00000120245 1151 ntBASIC6.83□□□□□ -1.32
P20040 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC6.83□□□□□ -1.32
P20040 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
P20040 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
P20040 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
P20040 Gm25770-201ENSMUST00000158566 115 ntBASIC6.83□□□□□ -1.32
P20040 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
P20040 Vmn1r113-202ENSMUST00000173723 924 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
P20040 Gm22132-201ENSMUST00000175316 100 ntBASIC6.83□□□□□ -1.32
P20040 Gm9149-201ENSMUST00000182724 1007 ntBASIC6.83□□□□□ -1.32
P20040 Gm24362-201ENSMUST00000183220 416 ntBASIC6.83□□□□□ -1.32
P20040 Gm29548-201ENSMUST00000187012 694 ntBASIC6.83□□□□□ -1.32
P20040 Gm28105-201ENSMUST00000187788 694 ntBASIC6.83□□□□□ -1.32
P20040 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
P20040 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC6.83□□□□□ -1.32
P20040 Gm37678-201ENSMUST00000192908 1146 ntBASIC6.83□□□□□ -1.32
P20040 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC6.83□□□□□ -1.32
P20040 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC6.83□□□□□ -1.32
P20040 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC6.83□□□□□ -1.32
P20040 Gm44285-201ENSMUST00000203557 940 ntBASIC6.83□□□□□ -1.32
P20040 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC6.83□□□□□ -1.32
P20040 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC6.83□□□□□ -1.32
P20040 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
P20040 AC153961.1-201ENSMUST00000217760 385 ntBASIC6.83□□□□□ -1.32
P20040 CT009546.3-201ENSMUST00000220914 208 ntBASIC6.83□□□□□ -1.32
P20040 AC133189.3-201ENSMUST00000226269 878 ntBASIC6.83□□□□□ -1.32
P20040 Gm7086-202ENSMUST00000228849 506 ntBASIC6.83□□□□□ -1.32
P20040 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
P20040 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
P20040 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
P20040 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
P20040 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
P20040 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
P20040 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC6.83□□□□□ -1.32
P20040 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
P20040 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
P20040 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
P20040 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
P20040 Gm37783-201ENSMUST00000192025 1856 ntBASIC6.83□□□□□ -1.32
P20040 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
P20040 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
P20040 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
P20040 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
P20040 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC6.82□□□□□ -1.32
P20040 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC6.82□□□□□ -1.32
P20040 Gm6493-201ENSMUST00000159889 1786 ntBASIC6.82□□□□□ -1.32
P20040 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
P20040 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC6.82□□□□□ -1.32
P20040 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Gm21043-201ENSMUST00000199316 1517 ntBASIC6.82□□□□□ -1.32
P20040 D130007C19Rik-201ENSMUST00000067277 1505 ntBASIC6.82□□□□□ -1.32
P20040 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC6.82□□□□□ -1.32
P20040 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC6.82□□□□□ -1.32
P20040 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
P20040 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC6.82□□□□□ -1.32
P20040 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Gm19028-201ENSMUST00000189614 1873 ntBASIC6.82□□□□□ -1.32
P20040 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Gm14528-201ENSMUST00000120615 231 ntBASIC6.82□□□□□ -1.32
P20040 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC6.82□□□□□ -1.32
P20040 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC6.82□□□□□ -1.32
P20040 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC6.82□□□□□ -1.32
P20040 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
P20040 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC6.82□□□□□ -1.32
P20040 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
P20040 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
P20040 Gm6750-201ENSMUST00000189273 268 ntBASIC6.82□□□□□ -1.32
P20040 Gm37185-201ENSMUST00000193852 410 ntBASIC6.82□□□□□ -1.32
P20040 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC6.82□□□□□ -1.32
P20040 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC6.82□□□□□ -1.32
P20040 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC6.82□□□□□ -1.32
P20040 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC6.82□□□□□ -1.32
P20040 Gm18192-201ENSMUST00000210174 941 ntBASIC6.82□□□□□ -1.32
P20040 Rpl32l-201ENSMUST00000216127 399 ntBASIC6.82□□□□□ -1.32
P20040 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC6.82□□□□□ -1.32
P20040 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC6.82□□□□□ -1.32
P20040 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC6.82□□□□□ -1.32
P20040 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
P20040 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms