Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm15843-201ENSMUST00000146593 529 ntBASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm24576-201ENSMUST00000175508 248 ntBASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm28114-201ENSMUST00000187232 379 ntBASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm7200-201ENSMUST00000188426 1163 ntBASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm5723-201ENSMUST00000203096 432 ntBASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 AC134462.1-201ENSMUST00000223047 552 ntTSL 2 BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm10155-201ENSMUST00000084598 483 ntBASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm5614-201ENSMUST00000091097 318 ntBASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Gm3742-201ENSMUST00000220907 1391 ntBASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Vps53Q8CCB4 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Gm8995-202ENSMUST00000208417 3490 ntBASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Gm37877-201ENSMUST00000191630 2709 ntBASIC9.08□□□□□ -0.96
Vps53Q8CCB4 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Gm15572-201ENSMUST00000119248 593 ntBASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Gm11882-201ENSMUST00000121463 506 ntBASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Gm6750-201ENSMUST00000189273 268 ntBASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Gm29145-201ENSMUST00000189914 456 ntBASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Gm38305-201ENSMUST00000194825 223 ntBASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Gm42667-201ENSMUST00000196132 234 ntBASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Gm43743-201ENSMUST00000197898 697 ntBASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Gm43553-201ENSMUST00000200900 685 ntBASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Gm5815-201ENSMUST00000050706 1185 ntBASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Slc36a3-202ENSMUST00000069816 893 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Olfr888-201ENSMUST00000075228 945 ntBASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Olfr702-204ENSMUST00000219803 1646 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 AC122878.1-201ENSMUST00000227716 1460 ntBASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC9.08□□□□□ -0.96
Vps53Q8CCB4 AC140280.1-201ENSMUST00000227826 1847 ntBASIC9.08□□□□□ -0.96
Vps53Q8CCB4 Gm45512-201ENSMUST00000210432 1553 ntBASIC9.07□□□□□ -0.96
Vps53Q8CCB4 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Ensa-201ENSMUST00000037983 3845 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Gm42837-201ENSMUST00000197071 2829 ntBASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Gm26429-201ENSMUST00000104829 110 ntBASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Gm6490-201ENSMUST00000111862 461 ntBASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Gm14749-201ENSMUST00000121269 333 ntBASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Vps53Q8CCB4 Gm29517-201ENSMUST00000190744 351 ntBASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms