Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Trub1Q8C0D0 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Trub1Q8C0D0 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trub1Q8C0D0 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trub1Q8C0D0 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Trub1Q8C0D0 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Trub1Q8C0D0 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trub1Q8C0D0 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trub1Q8C0D0 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trub1Q8C0D0 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trub1Q8C0D0 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Gm45807-201ENSMUST00000209142 2874 ntBASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Gm43331-201ENSMUST00000197991 1689 ntBASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Gm26831-201ENSMUST00000181458 1380 ntBASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Gm44509-201ENSMUST00000205400 1324 ntBASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Gm22022-201ENSMUST00000104355 127 ntBASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Gm13929-201ENSMUST00000117553 1125 ntBASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Gm11416-201ENSMUST00000119111 863 ntBASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Gm13622-201ENSMUST00000120658 433 ntBASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Gm15079-201ENSMUST00000121943 216 ntBASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Gm23822-201ENSMUST00000158739 128 ntBASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Traj54-201ENSMUST00000165071 54 ntBASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Gm17129-201ENSMUST00000168168 505 ntBASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Mir6340-201ENSMUST00000183857 119 ntBASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Rpl32l-201ENSMUST00000216127 399 ntBASIC7.9□□□□□ -1.14
Trub1Q8C0D0 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Vmn1r41-204ENSMUST00000227039 985 ntBASIC7.9□□□□□ -1.14
Trub1Q8C0D0 CT009550.2-201ENSMUST00000228851 399 ntBASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Gm38099-201ENSMUST00000193280 3170 ntBASIC7.9□□□□□ -1.14
Trub1Q8C0D0 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.9□□□□□ -1.15
Trub1Q8C0D0 Gm20731-201ENSMUST00000193462 2288 ntBASIC7.9□□□□□ -1.15
Trub1Q8C0D0 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trub1Q8C0D0 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.15
Trub1Q8C0D0 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
Trub1Q8C0D0 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Gm38147-201ENSMUST00000192397 1798 ntBASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Gm44116-201ENSMUST00000204269 1525 ntBASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Duxbl2-201ENSMUST00000100810 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Gm12844-201ENSMUST00000119463 582 ntBASIC7.89□□□□□ -1.15
Trub1Q8C0D0 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Gm12599-201ENSMUST00000120534 792 ntBASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Gm16523-201ENSMUST00000121253 592 ntBASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Gm16407-201ENSMUST00000122134 567 ntBASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Gm25845-201ENSMUST00000122588 310 ntBASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Gm22562-201ENSMUST00000157334 111 ntBASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Gm24530-201ENSMUST00000157948 288 ntBASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Gm26736-201ENSMUST00000180425 1236 ntBASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Mir6922-201ENSMUST00000185099 66 ntBASIC7.89□□□□□ -1.15
Trub1Q8C0D0 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC7.89□□□□□ -1.15
Trub1Q8C0D0 Gm4120-201ENSMUST00000220456 578 ntBASIC7.89□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 205.4 ms