Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Msh6P54276 Gm25344-201ENSMUST00000104503 132 ntBASIC9.79□□□□□ -0.84
Msh6P54276 Gm13414-201ENSMUST00000117516 727 ntBASIC9.79□□□□□ -0.84
Msh6P54276 Gm13229-201ENSMUST00000118238 340 ntBASIC9.79□□□□□ -0.84
Msh6P54276 Gm11810-201ENSMUST00000118311 333 ntBASIC9.79□□□□□ -0.84
Msh6P54276 Gm11443-201ENSMUST00000118790 479 ntBASIC9.79□□□□□ -0.84
Msh6P54276 Gm9378-201ENSMUST00000120315 471 ntBASIC9.79□□□□□ -0.84
Msh6P54276 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Msh6P54276 Gm16102-201ENSMUST00000160955 420 ntBASIC9.79□□□□□ -0.84
Msh6P54276 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Msh6P54276 Gm28266-201ENSMUST00000191410 439 ntBASIC9.79□□□□□ -0.84
Msh6P54276 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC9.79□□□□□ -0.84
Msh6P54276 Gm8575-201ENSMUST00000210262 521 ntBASIC9.79□□□□□ -0.84
Msh6P54276 AC123920.1-201ENSMUST00000221449 384 ntBASIC9.79□□□□□ -0.84
Msh6P54276 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC9.79□□□□□ -0.84
Msh6P54276 CT009527.2-201ENSMUST00000225386 606 ntBASIC9.79□□□□□ -0.84
Msh6P54276 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Msh6P54276 Arpp21-201ENSMUST00000035085 3254 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Msh6P54276 Gm37200-201ENSMUST00000193689 2172 ntBASIC9.79□□□□□ -0.84
Msh6P54276 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Msh6P54276 Polq-201ENSMUST00000054034 8552 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Msh6P54276 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Msh6P54276 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC9.79□□□□□ -0.84
Msh6P54276 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Msh6P54276 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Msh6P54276 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Msh6P54276 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC9.79□□□□□ -0.84
Msh6P54276 Slc38a9-201ENSMUST00000052514 8910 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Msh6P54276 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Msh6P54276 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Msh6P54276 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Msh6P54276 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Msh6P54276 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Gm37549-201ENSMUST00000194096 4065 ntBASIC9.78□□□□□ -0.84
Msh6P54276 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Efcab6-207ENSMUST00000156187 5012 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Gm14531-201ENSMUST00000120845 285 ntBASIC9.78□□□□□ -0.84
Msh6P54276 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Msh6P54276 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Gm23007-201ENSMUST00000158951 177 ntBASIC9.78□□□□□ -0.84
Msh6P54276 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC9.78□□□□□ -0.84
Msh6P54276 Gm29383-201ENSMUST00000188284 480 ntBASIC9.78□□□□□ -0.84
Msh6P54276 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Gm18860-201ENSMUST00000212029 764 ntBASIC9.78□□□□□ -0.84
Msh6P54276 Gm45725-201ENSMUST00000212962 337 ntBASIC9.78□□□□□ -0.84
Msh6P54276 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC9.78□□□□□ -0.84
Msh6P54276 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Msh6P54276 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Gm37120-201ENSMUST00000193350 5959 ntBASIC9.78□□□□□ -0.84
Msh6P54276 Adgrl2-204ENSMUST00000195988 4541 ntTSL 5 BASIC9.78□□□□□ -0.84
Msh6P54276 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Msh6P54276 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Klhl41-201ENSMUST00000100050 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Msh6P54276 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Msh6P54276 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Msh6P54276 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Msh6P54276 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Msh6P54276 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Msh6P54276 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.84
Msh6P54276 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
Msh6P54276 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC9.77□□□□□ -0.84
Msh6P54276 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Msh6P54276 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Msh6P54276 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Msh6P54276 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC9.77□□□□□ -0.84
Msh6P54276 Gm28580-201ENSMUST00000186767 88 ntBASIC9.77□□□□□ -0.84
Msh6P54276 Gm29143-201ENSMUST00000189462 201 ntBASIC9.77□□□□□ -0.84
Msh6P54276 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Msh6P54276 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Msh6P54276 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC9.77□□□□□ -0.84
Msh6P54276 Gm43560-201ENSMUST00000198100 773 ntBASIC9.77□□□□□ -0.84
Msh6P54276 Gm43776-201ENSMUST00000199729 2914 ntBASIC9.77□□□□□ -0.84
Msh6P54276 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.84
Msh6P54276 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC9.77□□□□□ -0.84
Msh6P54276 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Msh6P54276 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Msh6P54276 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC9.77□□□□□ -0.84
Msh6P54276 AC163296.1-202ENSMUST00000218395 661 ntBASIC9.77□□□□□ -0.84
Msh6P54276 AC163296.1-201ENSMUST00000220004 1266 ntBASIC9.77□□□□□ -0.84
Msh6P54276 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC9.77□□□□□ -0.84
Msh6P54276 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Msh6P54276 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Msh6P54276 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Msh6P54276 Lpar2-201ENSMUST00000034325 5701 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Msh6P54276 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Msh6P54276 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms