Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm29119-201ENSMUST00000189973 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28607-201ENSMUST00000190142 339 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28716-201ENSMUST00000190217 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29239-201ENSMUST00000190304 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28837-201ENSMUST00000190397 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28968-201ENSMUST00000190413 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28531-201ENSMUST00000190529 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28165-201ENSMUST00000190669 694 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm29181-201ENSMUST00000191288 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm28121-201ENSMUST00000191420 339 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm38229-201ENSMUST00000191931 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm32347-201ENSMUST00000192944 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm38121-201ENSMUST00000193213 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC10.04□□□□□ -0.8
Col18a1P39061 Gm38035-201ENSMUST00000194427 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm38350-201ENSMUST00000194789 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm37990-201ENSMUST00000195821 696 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Gm18363-201ENSMUST00000221671 730 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Col18a1P39061 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Tubd1-205ENSMUST00000167178 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Col18a1P39061 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Zbtb44-206ENSMUST00000217092 2472 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Col18a1P39061 AC061963.2-201ENSMUST00000213541 2739 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Prickle2-202ENSMUST00000113445 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Gm43219-201ENSMUST00000197972 1937 ntBASIC10.04□□□□□ -0.8
Col18a1P39061 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col18a1P39061 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
Col18a1P39061 Gm11821-201ENSMUST00000117335 979 ntBASIC10.03□□□□□ -0.8
Col18a1P39061 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Col18a1P39061 Gm9672-201ENSMUST00000166437 425 ntBASIC10.03□□□□□ -0.8
Col18a1P39061 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC10.03□□□□□ -0.8
Col18a1P39061 Gm7369-201ENSMUST00000192738 936 ntBASIC10.03□□□□□ -0.8
Col18a1P39061 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC10.03□□□□□ -0.8
Col18a1P39061 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC10.03□□□□□ -0.8
Col18a1P39061 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Col18a1P39061 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC10.03□□□□□ -0.8
Col18a1P39061 Gm4042-201ENSMUST00000216946 637 ntBASIC10.03□□□□□ -0.8
Col18a1P39061 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col18a1P39061 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Col18a1P39061 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col18a1P39061 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Col18a1P39061 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col18a1P39061 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Col18a1P39061 Tifab-202ENSMUST00000225063 2718 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Col18a1P39061 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC10.03□□□□□ -0.8
Col18a1P39061 Zfp758-204ENSMUST00000149699 2876 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col18a1P39061 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Col18a1P39061 Pnpla1os-201ENSMUST00000146779 3946 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Col18a1P39061 CT025645.1-201ENSMUST00000222760 4322 ntBASIC10.03□□□□□ -0.8
Col18a1P39061 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Col18a1P39061 Adh6a-201ENSMUST00000013455 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col18a1P39061 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Col18a1P39061 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Col18a1P39061 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col18a1P39061 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col18a1P39061 n-R5s178-201ENSMUST00000104249 114 ntBASIC10.03□□□□□ -0.8
Col18a1P39061 Gm14891-201ENSMUST00000117378 596 ntBASIC10.03□□□□□ -0.8
Col18a1P39061 Gm9506-201ENSMUST00000118516 320 ntBASIC10.03□□□□□ -0.8
Col18a1P39061 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Col18a1P39061 Gm21147-201ENSMUST00000186046 913 ntBASIC10.03□□□□□ -0.8
Col18a1P39061 Gm29143-201ENSMUST00000189462 201 ntBASIC10.03□□□□□ -0.8
Col18a1P39061 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC10.03□□□□□ -0.8
Col18a1P39061 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC10.03□□□□□ -0.8
Col18a1P39061 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.03□□□□□ -0.8
Col18a1P39061 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Col18a1P39061 Gm43339-201ENSMUST00000200032 1606 ntBASIC10.03□□□□□ -0.8
Col18a1P39061 Pcdh9-201ENSMUST00000068992 3714 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col18a1P39061 Gm17076-201ENSMUST00000165185 1401 ntBASIC10.03□□□□□ -0.8
Col18a1P39061 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col18a1P39061 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC10.02□□□□□ -0.8
Col18a1P39061 Cfap43-205ENSMUST00000160247 5264 ntTSL 5 BASIC10.02□□□□□ -0.8
Col18a1P39061 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Col18a1P39061 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Col18a1P39061 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Col18a1P39061 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Col18a1P39061 Ncaph2-203ENSMUST00000088717 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Col18a1P39061 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC10.02□□□□□ -0.8
Col18a1P39061 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Col18a1P39061 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Col18a1P39061 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Col18a1P39061 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC10.02□□□□□ -0.81
Col18a1P39061 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col18a1P39061 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Col18a1P39061 Lrrk2-201ENSMUST00000060642 8275 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col18a1P39061 Gm26340-201ENSMUST00000102365 99 ntBASIC10.02□□□□□ -0.81
Col18a1P39061 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Col18a1P39061 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Col18a1P39061 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col18a1P39061 Gm18562-201ENSMUST00000209949 915 ntBASIC10.02□□□□□ -0.81
Col18a1P39061 Gm4972-201ENSMUST00000211108 1254 ntBASIC10.02□□□□□ -0.81
Col18a1P39061 AC154828.2-201ENSMUST00000220908 1070 ntBASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms