Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 Gm37822-201ENSMUST00000192618 1109 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 Gm7270-202ENSMUST00000195850 1131 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 Gm7631-201ENSMUST00000196935 1100 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 1700041I07Rik-201ENSMUST00000197536 435 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 Gm44721-201ENSMUST00000206978 472 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 Gm44610-201ENSMUST00000209012 3827 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 Gm8804-201ENSMUST00000212292 798 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 Gm35135-201ENSMUST00000219885 990 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 Gm32834-202ENSMUST00000222417 655 ntTSL 3 BASIC6.3□□□□□ -1.4
Cdx1P18111 Zfp637-211ENSMUST00000223041 1128 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 AC131745.3-201ENSMUST00000223582 554 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 AC163638.1-201ENSMUST00000224818 392 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 AC107663.2-201ENSMUST00000225534 1234 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 AC137117.3-201ENSMUST00000226265 485 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 Gm10024-201ENSMUST00000075421 553 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cdx1P18111 Gm20302-201ENSMUST00000080671 275 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Cdx1P18111 A830036E02Rik-202ENSMUST00000128904 2768 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Cdx1P18111 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 0610031O16Rik-203ENSMUST00000185046 1429 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cdx1P18111 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdx1P18111 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 Gm37169-201ENSMUST00000195599 4161 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Cdx1P18111 Grip1-204ENSMUST00000105261 3608 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
Cdx1P18111 Gm9314-201ENSMUST00000199881 1528 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 Gm15328-204ENSMUST00000210330 1518 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdx1P18111 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx1P18111 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx1P18111 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx1P18111 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx1P18111 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx1P18111 Gm15681-201ENSMUST00000137501 2704 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx1P18111 Gm15283-201ENSMUST00000125308 1451 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx1P18111 Gm38195-201ENSMUST00000194247 1499 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.29□□□□□ -1.4
Cdx1P18111 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.29□□□□□ -1.4
Cdx1P18111 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Cdx1P18111 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Cdx1P18111 Gm14427-201ENSMUST00000117183 635 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Gm13198-201ENSMUST00000119322 826 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Gm14186-201ENSMUST00000120804 137 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Gm9060-201ENSMUST00000120926 805 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC6.29□□□□□ -1.4
Cdx1P18111 Apoc2-202ENSMUST00000134116 569 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Cdx1P18111 1700003M07Rik-201ENSMUST00000139884 541 ntTSL 2 BASIC6.29□□□□□ -1.4
Cdx1P18111 D630023F18Rik-202ENSMUST00000148020 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx1P18111 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx1P18111 Gm23822-201ENSMUST00000158739 128 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 4930519F09Rik-202ENSMUST00000163084 1111 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx1P18111 Pabpn1-208ENSMUST00000172557 700 ntAPPRIS ALT2 TSL 3 BASIC6.29□□□□□ -1.4
Cdx1P18111 Gm24307-201ENSMUST00000178512 101 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC6.29□□□□□ -1.4
Cdx1P18111 Gm27150-201ENSMUST00000183441 1038 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Gm27228-201ENSMUST00000184500 1038 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Gm29120-201ENSMUST00000186111 696 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Gm20587-201ENSMUST00000186367 1186 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Gm21840-201ENSMUST00000187212 696 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Gm29420-201ENSMUST00000187261 694 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Gm21848-201ENSMUST00000187722 696 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Gm29623-201ENSMUST00000188316 696 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Gm21841-201ENSMUST00000189958 696 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Gm21757-201ENSMUST00000191075 696 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Gm28946-201ENSMUST00000191176 696 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Gm5256-201ENSMUST00000191412 877 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC6.29□□□□□ -1.4
Cdx1P18111 Gm7115-201ENSMUST00000193706 832 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC6.29□□□□□ -1.4
Cdx1P18111 Gm23604-202ENSMUST00000198428 137 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Igkv12-42-201ENSMUST00000198769 327 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Ighv8-16-201ENSMUST00000199258 294 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Gm43069-201ENSMUST00000201006 859 ntTSL 3 BASIC6.29□□□□□ -1.4
Cdx1P18111 Gm6312-201ENSMUST00000204060 1194 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Cdx1P18111 Lilrb4a-215ENSMUST00000220182 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx1P18111 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC6.29□□□□□ -1.4
Cdx1P18111 AC163038.1-201ENSMUST00000223632 1142 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 AC167013.6-201ENSMUST00000226587 1067 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 AC140406.2-201ENSMUST00000227539 481 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 AC124715.1-201ENSMUST00000228480 754 ntBASIC6.29□□□□□ -1.4
Cdx1P18111 Msr1-201ENSMUST00000026021 1424 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Cdx1P18111 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Cdx1P18111 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx1P18111 Tas2r138-201ENSMUST00000076565 996 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Cdx1P18111 Snora57-201ENSMUST00000093658 148 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms